Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30274
(454 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M33950-1|AAA28746.1| 260|Drosophila melanogaster protein ( D.me... 116 1e-26
AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p pro... 116 1e-26
AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB... 116 1e-26
AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA... 116 1e-26
BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p pro... 79 2e-15
AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-P... 79 2e-15
AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferatin... 79 2e-15
AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein. 59 3e-09
AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-P... 27 8.9
>M33950-1|AAA28746.1| 260|Drosophila melanogaster protein (
D.melanogaster proliferatingcell nuclear antigen (PCNA)
gene, complete cds. ).
Length = 260
Score = 116 bits (280), Expect = 1e-26
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1
Query: 256 VSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFE 435
VSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FE
Sbjct: 45 VSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFE 104
Query: 436 SPNQEK 453
S NQEK
Sbjct: 105 SANQEK 110
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +2
Query: 125 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDN 250
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDN
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDN 42
>AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p
protein.
Length = 260
Score = 116 bits (280), Expect = 1e-26
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1
Query: 256 VSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFE 435
VSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FE
Sbjct: 45 VSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFE 104
Query: 436 SPNQEK 453
S NQEK
Sbjct: 105 SANQEK 110
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +2
Query: 125 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDN 250
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDN
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDN 42
>AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB,
isoform B protein.
Length = 260
Score = 116 bits (280), Expect = 1e-26
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1
Query: 256 VSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFE 435
VSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FE
Sbjct: 45 VSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFE 104
Query: 436 SPNQEK 453
S NQEK
Sbjct: 105 SANQEK 110
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +2
Query: 125 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDN 250
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDN
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDN 42
>AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA,
isoform A protein.
Length = 260
Score = 116 bits (280), Expect = 1e-26
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1
Query: 256 VSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFE 435
VSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FE
Sbjct: 45 VSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFE 104
Query: 436 SPNQEK 453
S NQEK
Sbjct: 105 SANQEK 110
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +2
Query: 125 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDN 250
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDN
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDN 42
>BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p
protein.
Length = 216
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +1
Query: 256 VSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFE 435
VSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FE
Sbjct: 6 VSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFE 65
Query: 436 SPNQEK 453
S +E+
Sbjct: 66 SDGKER 71
>AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-PA
protein.
Length = 255
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +1
Query: 256 VSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFE 435
VSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FE
Sbjct: 45 VSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFE 104
Query: 436 SPNQEK 453
S +E+
Sbjct: 105 SDGKER 110
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/42 (50%), Positives = 35/42 (83%)
Frame = +2
Query: 125 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDN 250
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDN
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDN 42
>AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferating
cell nuclear antigen2 protein.
Length = 255
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = +1
Query: 256 VSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFE 435
VSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FE
Sbjct: 45 VSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFE 104
Query: 436 SPNQEK 453
S +E+
Sbjct: 105 SDGKER 110
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/42 (50%), Positives = 35/42 (83%)
Frame = +2
Query: 125 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDN 250
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDN
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDN 42
>AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein.
Length = 36
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +2
Query: 125 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQ 232
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQ 36
>AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-PA,
isoform A protein.
Length = 1012
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 116 NINMFEARLLRSSILKKVLEAIKDLLTQATFDCD 217
+IN+ E+R L L++VL K A+FDCD
Sbjct: 202 SINLDESRELLLITLREVLSMNKAYTLSASFDCD 235
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,811,733
Number of Sequences: 53049
Number of extensions: 326992
Number of successful extensions: 572
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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