Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30272
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.66 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +2

Query: 56   WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS 172
            W+S ++   W  T    +  +R   +S   RPT  ++P+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081



 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 95   PVSTSHWSRTRQSSLPRRPT 154
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196



 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 307  PSKPSVLSNSSTGVQPVSRSVSTTSHP 387
            P+KPS    S+T       + STT+ P
Sbjct: 1169 PTKPSYRPPSTTNHWQTKTTTSTTTRP 1195


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 210 LVGGLEACVCDLG 172
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 78  PQRLASTHLQSPNTQTHPSA 97


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 78  PQRLASTHLQSPNTQTHPSA 97


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 78  PQRLASTHLQSPNTQTHPSA 97


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 78  PQRLASTHLQSPNTQTHPSA 97


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 78  PQRLASTHLQSPNTQTHPSA 97


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 34  PQRLASTHLQSPNTQTHPSA 53


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 78  PQRLASTHLQSPNTQTHPSA 97


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 PRRPTMNSFPSPRSQTHASS 199
           P+R       SP +QTH S+
Sbjct: 78  PQRLASTHLQSPNTQTHPSA 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,013
Number of Sequences: 336
Number of extensions: 2957
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)