Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30272
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 158 2e-39
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 158 2e-39
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 157 3e-39
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 157 3e-39
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 157 3e-39
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 157 4e-39
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 153 8e-38
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 79 1e-15
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 79 1e-15
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 79 1e-15
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 79 1e-15
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 79 2e-15
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 79 2e-15
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 79 2e-15
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 78 3e-15
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 78 3e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 42 2e-04
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 42 2e-04
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.020
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.43
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 0.75
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 30 1.00
At2g15020.1 68415.m01710 expressed protein and genefinder 28 3.0
At1g68080.1 68414.m07777 expressed protein 28 3.0
At1g62870.1 68414.m07099 expressed protein 28 3.0
At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family... 27 5.3
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 27 7.0
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 27 7.0
At5g58860.1 68418.m07375 cytochrome P450 86A1 (CYP86) (CYP86A1) ... 27 9.3
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 27 9.3
At4g32920.1 68417.m04685 glycine-rich protein 27 9.3
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 27 9.3
At2g07360.1 68415.m00843 SH3 domain-containing protein contains ... 27 9.3
At1g67140.1 68414.m07638 expressed protein 27 9.3
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 158 bits (383), Expect = 2e-39
Identities = 67/80 (83%), Positives = 76/80 (95%)
Frame = +3
Query: 255 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 434
++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 435 MLSNTTAIAEAWARLDHKFD 494
M+SN TA+AE ++R+DHKFD
Sbjct: 377 MISNNTAVAEVFSRIDHKFD 396
Score = 153 bits (372), Expect = 5e-38
Identities = 69/83 (83%), Positives = 75/83 (90%)
Frame = +1
Query: 4 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 183
QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA KAYHEQLSV EIT
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEIT 292
Query: 184 NACFEPANQMVKCDPRHGKYMAC 252
NA FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NAVFEPASMMAKCDPRHGKYMAC 315
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 158 bits (383), Expect = 2e-39
Identities = 67/80 (83%), Positives = 76/80 (95%)
Frame = +3
Query: 255 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 434
++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 435 MLSNTTAIAEAWARLDHKFD 494
M+SN TA+AE ++R+DHKFD
Sbjct: 377 MISNNTAVAEVFSRIDHKFD 396
Score = 153 bits (372), Expect = 5e-38
Identities = 69/83 (83%), Positives = 75/83 (90%)
Frame = +1
Query: 4 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 183
QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA KAYHEQLSV EIT
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEIT 292
Query: 184 NACFEPANQMVKCDPRHGKYMAC 252
NA FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NAVFEPASMMAKCDPRHGKYMAC 315
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 157 bits (382), Expect = 3e-39
Identities = 67/80 (83%), Positives = 77/80 (96%)
Frame = +3
Query: 255 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 434
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 435 MLSNTTAIAEAWARLDHKFD 494
M+SN+T++AE ++R+DHKFD
Sbjct: 377 MISNSTSVAEVFSRIDHKFD 396
Score = 157 bits (381), Expect = 4e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +1
Query: 4 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 183
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 184 NACFEPANQMVKCDPRHGKYMAC 252
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 157 bits (382), Expect = 3e-39
Identities = 67/80 (83%), Positives = 77/80 (96%)
Frame = +3
Query: 255 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 434
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 435 MLSNTTAIAEAWARLDHKFD 494
M+SN+T++AE ++R+DHKFD
Sbjct: 377 MISNSTSVAEVFSRIDHKFD 396
Score = 157 bits (381), Expect = 4e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +1
Query: 4 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 183
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 184 NACFEPANQMVKCDPRHGKYMAC 252
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 157 bits (382), Expect = 3e-39
Identities = 67/80 (83%), Positives = 77/80 (96%)
Frame = +3
Query: 255 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 434
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 435 MLSNTTAIAEAWARLDHKFD 494
M+SN+T++AE ++R+DHKFD
Sbjct: 377 MISNSTSVAEVFSRIDHKFD 396
Score = 157 bits (381), Expect = 4e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +1
Query: 4 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 183
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 184 NACFEPANQMVKCDPRHGKYMAC 252
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 157 bits (381), Expect = 4e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +1
Query: 4 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 183
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 184 NACFEPANQMVKCDPRHGKYMAC 252
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
Score = 141 bits (342), Expect = 2e-34
Identities = 61/70 (87%), Positives = 68/70 (97%)
Frame = +3
Query: 255 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 434
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 435 MLSNTTAIAE 464
M+SN+T++AE
Sbjct: 377 MISNSTSVAE 386
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (370), Expect = 8e-38
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = +3
Query: 255 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 434
++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVC 376
Query: 435 MLSNTTAIAEAWARLDHKFD 494
M+SN TA+AE ++R+DHKFD
Sbjct: 377 MISNNTAVAEVFSRIDHKFD 396
Score = 146 bits (353), Expect = 1e-35
Identities = 64/83 (77%), Positives = 72/83 (86%)
Frame = +1
Query: 4 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 183
Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS+ KAYHEQ SV EIT
Sbjct: 233 QTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEIT 292
Query: 184 NACFEPANQMVKCDPRHGKYMAC 252
+ FEP+N M KCDPRHGKYMAC
Sbjct: 293 TSVFEPSNMMAKCDPRHGKYMAC 315
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + LSV E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 35.1 bits (77), Expect = 0.026
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ + I+ K + FV+W P K + + P G ++ A
Sbjct: 316 VFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTF 367
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 368 IGNSTSIQEMFRRVSEQF 385
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + LSV E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 34.7 bits (76), Expect = 0.035
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ + ++ K + FV+W P K + + P G ++ A
Sbjct: 316 VFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG----LKMASTF 367
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 368 IGNSTSIQEMFRRVSEQF 385
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 294 MWDAKNMMCAADPRHGRYL 312
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ I ++ K + FV+W P K + PPT ++ A
Sbjct: 317 MFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTF 368
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 369 VGNSTSIQEMFRRVSEQF 386
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 294 MWDSKNMMCAADPRHGRYL 312
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ I I+ K + FV+W P K + PP ++ A
Sbjct: 317 IFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATF 368
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 369 VGNSTSIQEMFRRVSEQF 386
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 293 MWDSKNMMCAADPRHGRYL 311
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ + ++ K + FV+W P K + PPT ++ A
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTF 367
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 368 IGNSTSIQEMFRRVSEQF 385
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 293 MWDSKNMMCAADPRHGRYL 311
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ + ++ K + FV+W P K + PPT ++ A
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTF 367
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 368 IGNSTSIQEMFRRVSEQF 385
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQ 292
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ + ++ K + FV+W P K + PPT ++ A
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTF 367
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 368 IGNSTSIQEMFRRVSEQF 385
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 78.2 bits (184), Expect = 3e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ + ++ K + FV+W P K + PPT ++ A
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTF 367
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 368 IGNSTSIQEMFRRVSEQF 385
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 78.2 bits (184), Expect = 3e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +1
Query: 10 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 190 CFEPANQMVKCDPRHGKYM 246
++ N M DPRHG+Y+
Sbjct: 293 MWDSKNMMCAADPRHGRYL 311
Score = 34.7 bits (76), Expect = 0.035
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 258 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 437
++RG + K+V+ + ++ K + FV+W P K + + P G + A
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG----LSMASTF 367
Query: 438 LSNTTAIAEAWARLDHKF 491
+ N+T+I E + R+ +F
Sbjct: 368 IGNSTSIQEMFRRVSEQF 385
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 IVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEIT 183
++S+ T +LR+ G +N DL +L+P PR HF + Y P+ + + + +V ++
Sbjct: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVM 294
Query: 184 NACFEPANQMVKCDPRH 234
+ N MV R+
Sbjct: 295 RRLLQTKNIMVSSYARN 311
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/82 (23%), Positives = 45/82 (54%)
Frame = +3
Query: 249 LLMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRA 428
+L + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ +
Sbjct: 322 ILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL--- 378
Query: 429 VCMLSNTTAIAEAWARLDHKFD 494
ML++ T+I ++R ++D
Sbjct: 379 --MLASHTSIRHLFSRCLSQYD 398
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 IVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEIT 183
++S+ T +LR+ G +N DL +L+P PR HF + Y P+ + + + +V ++
Sbjct: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVM 294
Query: 184 NACFEPANQMVKCDPRH 234
+ N MV R+
Sbjct: 295 RRLLQTKNIMVSSYARN 311
Score = 35.5 bits (78), Expect = 0.020
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = +3
Query: 249 LLMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 392
+L + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 322 ILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYV 369
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.020
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 15 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 149
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.43
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 49 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 189
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 380 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 276
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 29.9 bits (64), Expect = 1.00
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 246 GLLMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 407
G L +G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 302 GSLPTLQGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At2g15020.1 68415.m01710 expressed protein and genefinder
Length = 526
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 43 GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 219
G N+ L +F ++L+P + F T A + K Y LS+ N+ E N++VK
Sbjct: 212 GLGNLGLKQFSSSLMPRHSLGFSYATEAHGLWILKGYFPILSMNVTNNSSNEVHNKIVK 270
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 338 DELDSTLGFDGSDGRVHILGYDVTTVQ 258
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 74 RLTWCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 205
R + C S S+ SRT L R P NS P P S S PP
Sbjct: 80 RCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family
protein
Length = 242
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 59 TSPSSR-LTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 235
T P+S TW + + ++S T +SLP+ +N + + A+SPP++ PV
Sbjct: 82 TKPNSTSFTWYPSRTGSYYFSFTNNTSLPKTCQLNQKLTVQVILAAASPPSQPPATAPVP 141
Query: 236 AS 241
S
Sbjct: 142 VS 143
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 89 LTPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASSPPTR 211
LTP T S++++S + P +SF S SQ+H S+P +
Sbjct: 270 LTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESNPSVK 314
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 89 LTPVSTSHWSRTRQS----SLPRRPTMNSFPSPRSQTHASSPPTR 211
LTP T S++++S + P +SF S SQ+H S+P +
Sbjct: 357 LTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESNPSVK 401
>At5g58860.1 68418.m07375 cytochrome P450 86A1 (CYP86) (CYP86A1) /
CYPLXXXVI / P450-dependent fatty acid omega-hydroxylase
identical to Cytochrome P450 86A1 (CYPLXXXVI)
(P450-dependent fatty acid omega-hydroxylase)
(SP:P48422) [Arabidopsis thaliana]
Length = 513
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -2
Query: 129 WRVRDQWEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLS 1
WR++ + + + + SLE+ E ++ A++++++S D LS
Sbjct: 233 WRIQKAMGIGSEDKLKKSLEVVETYMNDAIDARKNSPSDDLLS 275
>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
kinase, putative
Length = 654
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 101 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 205
S+S T LP +P S P P H S+PP
Sbjct: 229 SSSFSGNTLLCGLPLQPCATSSPPPSLTPHISTPP 263
>At4g32920.1 68417.m04685 glycine-rich protein
Length = 1432
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 373 LIPTLKPVGHQSTNWIVRLVLMVAMAAFTSLGTTSPRYSIS 251
LI KPVGHQ +V VL++ T L T YSIS
Sbjct: 1263 LIHNTKPVGHQDLVGLVISVLLLGDLTLTLL-TLLQLYSIS 1302
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 410 QVASGHHGGWLVVDTDLETGWTPVDELDSTLGF 312
Q+ SGHH VDTD E + D L F
Sbjct: 184 QIVSGHHSEVWSVDTDPEERYVVTGSADQELRF 216
>At2g07360.1 68415.m00843 SH3 domain-containing protein contains
Pfam profile PF00018: SH3 domain
Length = 1196
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 304 LPSKPSVLSNSSTGVQPVSRSVSTTSH 384
+P++ + S SST QP S S S++SH
Sbjct: 20 VPAQSTSSSASSTASQPTSASASSSSH 46
>At1g67140.1 68414.m07638 expressed protein
Length = 2158
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 373 LIPTLKPVGHQSTNWIVRLVLMVAMAAFTSLGTTSPRYSISKPCTCHDGGRISP 212
L+ L H ++W + V +V T + ++ IS PC C+ ISP
Sbjct: 1424 LLQVLSYSFHMDSSWDILAVSVVQQLVGTKIYYSTVGEIISYPCFCYPAIGISP 1477
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,043,319
Number of Sequences: 28952
Number of extensions: 273785
Number of successful extensions: 985
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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