Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30268
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    42   2e-05
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       25   2.0  
AY146722-1|AAO12082.1|  107|Anopheles gambiae odorant-binding pr...    24   3.6  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    24   3.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +1

Query: 52   RLTHRDIAARNCLITSKLQLKLSCPALTR-GPLSREYYKLHDQVIPLRWCPLEVVLEGDY 228
            RL HRD+AARN L+ +   +K++   L +      + Y+     +P++W  LE +    +
Sbjct: 954  RLVHRDLAARNVLVQTPSCVKITVFGLAKLLDFDSDEYRAAGGKMPIKWLALECIRHRVF 1013

Query: 229  STKSDVY 249
            ++KSDV+
Sbjct: 1014 TSKSDVW 1020



 Score = 28.7 bits (61), Expect = 0.17
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +3

Query: 261  TVWEMYTQAELPFAKXNDSSVLDRLKTGALEWSVPASMPQSVADILKRCWSQSPTDRPQF 440
            T+WE+ T    P+       V + ++ G  +   P      V  IL  CW      RP F
Sbjct: 1025 TIWELLTYGARPYENVPAKDVPELIEIGH-KLPQPDICSLDVYCILLSCWVLDADARPTF 1083

Query: 441  AEVCE 455
             ++ E
Sbjct: 1084 KQLAE 1088


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 396 LKRCWSQSPTDRPQF 440
           LKR   Q+PTD PQF
Sbjct: 35  LKRLSGQNPTDEPQF 49


>AY146722-1|AAO12082.1|  107|Anopheles gambiae odorant-binding
           protein AgamOBP16 protein.
          Length = 107

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/70 (20%), Positives = 30/70 (42%)
 Frame = -1

Query: 469 TMLISSQTSANCGRSVGDWLQQRLSMSATDCGMEAGTLHSSAPVFSRSSTELSFXFAKGS 290
           ++ + +  SAN  +S+   L Q++    ++C  E GT       F+   +  +    +  
Sbjct: 9   SICLMATASANAPKSLSPELLQQMGQFRSECLRETGTTDEQIEQFNSPQSVQASHELQCY 68

Query: 289 SACVYISHTV 260
             C++  H V
Sbjct: 69  MYCMFRLHNV 78


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/70 (20%), Positives = 30/70 (42%)
 Frame = -1

Query: 469 TMLISSQTSANCGRSVGDWLQQRLSMSATDCGMEAGTLHSSAPVFSRSSTELSFXFAKGS 290
           ++ + +  SAN  +S+   L Q++    ++C  E GT       F+   +  +    +  
Sbjct: 9   SICLMATASANAPKSLSPELLQQMGQFRSECLRETGTTDEQIEQFNSPQSVQASHELQCY 68

Query: 289 SACVYISHTV 260
             C++  H V
Sbjct: 69  MYCMFRLHNV 78


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -1

Query: 214  GPLLADTNGEGSPGRAACS--TRETAARGSGPGRTAXA 107
            GP    T+G  S G A+ S  T E    GSG G T  A
Sbjct: 1396 GPSNESTDGGESMGTASTSSQTDEPRPGGSGGGHTGPA 1433


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,494
Number of Sequences: 2352
Number of extensions: 13420
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)