Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30265
(583 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 212 9e-55
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 212 9e-55
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 212 9e-55
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 212 9e-55
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 209 5e-54
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 81 4e-15
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 54 3e-07
AY458845-1|AAS13443.1| 593|Homo sapiens KRAB-domain-containing ... 30 5.2
AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens ... 30 6.8
AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens ... 30 6.8
AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens ... 30 6.8
AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens ... 30 6.8
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 212 bits (517), Expect = 9e-55
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +3
Query: 255 RNNGKKLMAVRIVKHAFXIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVD 434
RNNGKKLM VRIVKHAF IIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVD
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVD 140
Query: 435 VSPLRRVNQAIWLLCTGAREAAFQNIXTIAECVADELINAAKGSSNSYA 581
VSPLRRVNQAIWLLCTGAREAAF+NI TIAEC+ADELINAAKGSSNSYA
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYA 189
Score = 128 bits (308), Expect = 2e-29
Identities = 57/77 (74%), Positives = 65/77 (84%)
Frame = +1
Query: 40 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 219
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 220 VERLTNSLMMHGGTMAK 270
VERLTNS+MMHG K
Sbjct: 69 VERLTNSMMMHGRNNGK 85
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 212 bits (517), Expect = 9e-55
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +3
Query: 255 RNNGKKLMAVRIVKHAFXIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVD 434
RNNGKKLM VRIVKHAF IIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVD
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVD 140
Query: 435 VSPLRRVNQAIWLLCTGAREAAFQNIXTIAECVADELINAAKGSSNSYA 581
VSPLRRVNQAIWLLCTGAREAAF+NI TIAEC+ADELINAAKGSSNSYA
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYA 189
Score = 132 bits (319), Expect = 9e-31
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = +1
Query: 40 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 219
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 220 VERLTNSLMMHGGTMAK 270
VERLTNS+MMHG K
Sbjct: 69 VERLTNSMMMHGRNNGK 85
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 212 bits (517), Expect = 9e-55
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +3
Query: 255 RNNGKKLMAVRIVKHAFXIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVD 434
RNNGKKLM VRIVKHAF IIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVD
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVD 140
Query: 435 VSPLRRVNQAIWLLCTGAREAAFQNIXTIAECVADELINAAKGSSNSYA 581
VSPLRRVNQAIWLLCTGAREAAF+NI TIAEC+ADELINAAKGSSNSYA
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYA 189
Score = 132 bits (319), Expect = 9e-31
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = +1
Query: 40 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 219
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 220 VERLTNSLMMHGGTMAK 270
VERLTNS+MMHG K
Sbjct: 69 VERLTNSMMMHGRNNGK 85
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 212 bits (517), Expect = 9e-55
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +3
Query: 255 RNNGKKLMAVRIVKHAFXIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVD 434
RNNGKKLM VRIVKHAF IIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVD
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVD 140
Query: 435 VSPLRRVNQAIWLLCTGAREAAFQNIXTIAECVADELINAAKGSSNSYA 581
VSPLRRVNQAIWLLCTGAREAAF+NI TIAEC+ADELINAAKGSSNSYA
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYA 189
Score = 132 bits (319), Expect = 9e-31
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = +1
Query: 40 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 219
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 220 VERLTNSLMMHGGTMAK 270
VERLTNS+MMHG K
Sbjct: 69 VERLTNSMMMHGRNNGK 85
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 209 bits (511), Expect = 5e-54
Identities = 102/109 (93%), Positives = 104/109 (95%)
Frame = +3
Query: 255 RNNGKKLMAVRIVKHAFXIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVD 434
RNNGKKLM VRIVKHAF IIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVD
Sbjct: 81 RNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVD 140
Query: 435 VSPLRRVNQAIWLLCTGAREAAFQNIXTIAECVADELINAAKGSSNSYA 581
VSPLRRVNQAIWLLCTGAREAAF+NI TIAEC+ADELINAAKGSSN YA
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFYA 189
Score = 132 bits (319), Expect = 9e-31
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = +1
Query: 40 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 219
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 220 VERLTNSLMMHGGTMAK 270
VERLTNS+MMHG K
Sbjct: 69 VERLTNSMMMHGRNNGK 85
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 80.6 bits (190), Expect = 4e-15
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +3
Query: 462 AIWLLCTGAREAAFQNIXTIAECVADELINAAKGSSNSYA 581
AIWLLCTGAREAAF+NI TIAEC+ADELINAAKGSSNSYA
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYA 40
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = +3
Query: 255 RNNGKKLMAVRIVKHAFXIIHLLTGENPLQVLVTA 359
RNNGKKLM VRIVKHAF IIHLLTGE L LV A
Sbjct: 18 RNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
Score = 39.9 bits (89), Expect = 0.006
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1
Query: 205 AQCPIVERLTNSLMMHGGTMAK 270
AQCPIVERLTNS+MMHG K
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGK 22
>AY458845-1|AAS13443.1| 593|Homo sapiens KRAB-domain-containing
zinc finger protein protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 18 GCGNHVFTTSRRHS*NQAFRQMELLRC 98
GCG + S+ HS +A+R+ EL +C
Sbjct: 403 GCGKRFYMNSQGHSHQRAYREEELYKC 429
>AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ45969 fis, clone PLACE7016454. ).
Length = 204
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 527 LCDCXNILKCSLTCTCAQKPDCLVDSAQG*NINGL 423
LC C ++ C+ C C K C S Q ++NG+
Sbjct: 45 LCVCVHVCICACICACVWKFPCRNHSVQTESLNGV 79
>AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ44741 fis, clone BRACE3027931. ).
Length = 398
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 95 MCKSLICLCRTTFPLKRSTQNIYLIQLA 178
+CKS C+C +T + ST+ Y QLA
Sbjct: 259 VCKSTYCICNSTHCVCNSTRTAYATQLA 286
>AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ37556 fis, clone BRCAN2028545. ).
Length = 149
Score = 29.9 bits (64), Expect = 6.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 554 CIN*FICNTLCDCXNILKCSLTCTCAQKPDCLV 456
C ++C +C C + C C CA C+V
Sbjct: 102 CACVYVCKRVCTCACVCMCVQVCMCASVHMCIV 134
>AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ12986 fis, clone NT2RP3000055. ).
Length = 171
Score = 29.9 bits (64), Expect = 6.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 95 MCKSLICLCRTTFPLKRSTQNIYLIQLA 178
+CKS C+C +T + ST+ Y QLA
Sbjct: 32 VCKSTYCICNSTHCVCNSTRTAYATQLA 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,438,249
Number of Sequences: 237096
Number of extensions: 1748364
Number of successful extensions: 3260
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3249
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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