Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30264
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0036 + 25786530-25786756,25788000-25788076,25788538-257886...    35   0.060
06_03_1338 - 29440373-29440534,29440993-29441083,29441799-294419...    33   0.18 
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284...    33   0.32 
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944...    28   9.1  
04_03_0520 - 16748646-16748741,16748821-16748895,16749260-167493...    28   9.1  

>01_06_0036 +
           25786530-25786756,25788000-25788076,25788538-25788625,
           25788706-25788786,25788866-25788940,25789048-25789149,
           25789589-25789726,25791559-25791585,25791696-25791786,
           25792423-25792584
          Length = 355

 Score = 35.1 bits (77), Expect = 0.060
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 9   DNIAKFGGDPNKITILGESSGSGAVTHHLLSPMSKD 116
           +NIA +GGDPN+I ++G+S+G+      L+    K+
Sbjct: 206 NNIASYGGDPNRIYLVGQSAGAHIAACALIEQAVKE 241


>06_03_1338 -
           29440373-29440534,29440993-29441083,29441799-29441942,
           29442094-29442159,29442589-29442729,29443077-29443178,
           29443264-29443338,29443469-29443549,29443670-29443739,
           29444063-29444139,29444392-29444660
          Length = 425

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 9   DNIAKFGGDPNKITILGESSGSGAVTHHLLSPMSKDLFHG 128
           +NIA +GGDP +I ++G+S+G+      LL    K+   G
Sbjct: 214 NNIASYGGDPERIYLVGQSAGAHIAACTLLHQAIKESGEG 253


>05_07_0228 -
           28526885-28527046,28527151-28527241,28528315-28528455,
           28528560-28528625,28529180-28529317,28529759-28529860,
           28530156-28530236,28530314-28530383,28530598-28530674,
           28531035-28531483
          Length = 458

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 9   DNIAKFGGDPNKITILGESSGSGAVTHHLLSPMSKD 116
           + +  +GGDPN+I ++G+S+G+      LL   +K+
Sbjct: 249 ETVGAYGGDPNQIYLMGQSAGAHIAACALLEQAAKE 284


>06_03_0710 +
           23792138-23792293,23792974-23793257,23794344-23794499,
           23795318-23795804,23795864-23796181,23796773-23797165,
           23797752-23798021
          Length = 687

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +2

Query: 158 RMGNC*WCERESIPSRESFRKRYKGYK*VA*ILRSV-PAISLANMTFMTQTSDE 316
           R G   W E+ ++ SR +FR+R   Y     + +SV  A+ L  + + +QTS+E
Sbjct: 408 RRGGIGWLEQFTVLSRRTFRERAADYLDKMRLAQSVGVALLLGLLWWKSQTSNE 461


>04_03_0520 -
           16748646-16748741,16748821-16748895,16749260-16749362,
           16749635-16749783,16750986-16751110,16751320-16751389
          Length = 205

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 31  VILIRLPYSARVLVLALSHTTYCPPCRKICSM 126
           V+L RL  + R     ++HT+Y PPC  + S+
Sbjct: 67  VLLTRLDLTWRKRTWEINHTSYSPPCVGLFSL 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,772,261
Number of Sequences: 37544
Number of extensions: 367211
Number of successful extensions: 817
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)