Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30264
         (749 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g15860.2 68418.m01856 expressed protein                             39   0.004
At5g15860.1 68418.m01855 expressed protein                             39   0.004
At3g02410.1 68416.m00228 hypothetical protein weak similarity to...    35   0.066
At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar...    33   0.15 
At2g23200.1 68415.m02771 protein kinase family protein contains ...    32   0.47 
At1g26120.1 68414.m03188 esterase-related contains similaity to ...    32   0.47 

>At5g15860.2 68418.m01856 expressed protein
          Length = 299

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 16/37 (43%), Positives = 26/37 (70%)
 Frame = +3

Query: 9   DNIAKFGGDPNKITILGESSGSGAVTHHLLSPMSKDL 119
           +NI+ FGGDPN+I ++G+S+G+      LL   +K+L
Sbjct: 217 NNISAFGGDPNRIYLMGQSAGAHIAACALLEQATKEL 253


>At5g15860.1 68418.m01855 expressed protein
          Length = 427

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 16/37 (43%), Positives = 26/37 (70%)
 Frame = +3

Query: 9   DNIAKFGGDPNKITILGESSGSGAVTHHLLSPMSKDL 119
           +NI+ FGGDPN+I ++G+S+G+      LL   +K+L
Sbjct: 217 NNISAFGGDPNRIYLMGQSAGAHIAACALLEQATKEL 253


>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
           kynurenine formamidase [Mus musculus] GI:21552719
          Length = 422

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 12/22 (54%), Positives = 20/22 (90%)
 Frame = +3

Query: 9   DNIAKFGGDPNKITILGESSGS 74
           +NI+ FGGDPN+I ++G+S+G+
Sbjct: 212 NNISAFGGDPNRIYLMGQSAGA 233


>At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar to
           Acylamino-acid-releasing enzyme (EC 3.4.19.1)
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
           (Swiss-Prot:P13676) [Rattus norvegicus]; annotated with
           nonconsensus TT and CT acceptor splice sites.
          Length = 764

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 9   DNIAKFG-GDPNKITILGESSGSGAVTHHLLSPMSKDLFHGAIAQSGVC 152
           D+  + G  DP++IT+LG S G G +T HL+   + D F  A A++ VC
Sbjct: 599 DHAIEMGIADPSRITVLGGSHG-GFLTTHLIG-QAPDKFVAAAARNPVC 645


>At2g23200.1 68415.m02771 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 834

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -1

Query: 503 SFLSNISFSNKRLRQTYDQSSRAP--YSLYQILKHPMDF*LKMLQHFGISFL 354
           S  +++SF+NK      DQSS AP  Y   +I +HP  +  K L   G+ F+
Sbjct: 62  SSTNSVSFTNKGTEVINDQSSVAPEIYRTVRIFRHPSSYKFK-LDSLGLHFV 112


>At1g26120.1 68414.m03188 esterase-related contains similaity to
           esterase 6 GI:606998 from [Drosophila simulans] and
           esterase GI:12584120 from [Sphingomonas elodea]
          Length = 476

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 12/40 (30%), Positives = 27/40 (67%)
 Frame = +3

Query: 9   DNIAKFGGDPNKITILGESSGSGAVTHHLLSPMSKDLFHG 128
           ++IA++GGDP++I ++G+S+G+      ++  + K+   G
Sbjct: 268 NHIAEYGGDPDRIYLMGQSAGAHIAACTIVEQVIKESGEG 307


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,567,654
Number of Sequences: 28952
Number of extensions: 312604
Number of successful extensions: 745
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)