Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30261
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.2  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 267 ELFLLDNSRGSGLLVLGRESVCGDVEVSLLSCSD 166
           ++FL D  RG     + +  VCG   V+LL+  D
Sbjct: 54  QMFLADRERGLKYYPIYKLDVCGTGGVNLLNPED 87


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 267 ELFLLDNSRGSGLLVLGRESVCGDVEVSLLSCSD 166
           +LFL +  RG     + +  VCG+  V+LL+  D
Sbjct: 54  QLFLAERERGLKYYPIYKLDVCGNGGVNLLNPED 87


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 203 HTLSRPRTSRPDPRELSSRNNSAFHRGAHRS 295
           HT  RP   +   R  +++ N   H G HR+
Sbjct: 157 HTGERPFKCKICGRAFTTKGNLKTHMGVHRA 187


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -1

Query: 388 WKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSVGTAMEC 269
           WK    T  +    + F+ LL I+FF +       T   C
Sbjct: 124 WKSYKRTQIFITCELFFVILLWISFFLNFMLHCNNTTWRC 163


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 182 RLTSTSPHTLSRPRTSRPDPRELSSR 259
           RLT      L  P T +P P ++S R
Sbjct: 238 RLTDEQLKELENPPTPKPRPTKVSRR 263


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 HSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGV 371
           + IAV  D   NE  +   N +KK+  +A   GV
Sbjct: 13  YPIAVLIDELKNEDVQLRLNSIKKLSTIALALGV 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,784
Number of Sequences: 336
Number of extensions: 3153
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)