Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30261
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456375-1|CAG30261.1|  384|Homo sapiens Em:AP000355.2 protein.       118   1e-26
BC139843-1|AAI39844.2|  389|Homo sapiens UPB1 protein protein.        118   1e-26
BC131703-1|AAI31704.1|  384|Homo sapiens UPB1 protein protein.        118   1e-26
AF169559-1|AAF06739.1|  387|Homo sapiens beta-ureidopropionase p...   118   1e-26
AF163312-1|AAF06735.1|  384|Homo sapiens beta-ureidopropionase p...   118   1e-26
AB013885-1|BAA88634.1|  384|Homo sapiens beta-ureidopropionase p...   118   1e-26

>CR456375-1|CAG30261.1|  384|Homo sapiens Em:AP000355.2 protein.
          Length = 384

 Score =  118 bits (285), Expect = 1e-26
 Identities = 52/87 (59%), Positives = 64/87 (73%)
 Frame = +3

Query: 240 PENCQVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 419
           P    VG++Q+ I +P + PV EQ  A+  ++K I++VA   GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 420 TREKQPWCEFAESAEDGPTTTFLRELA 500
           TREK PW EFAESAEDGPTT F ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score =  106 bits (254), Expect = 8e-23
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 512 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGH 688
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHIPRVGDFNES YYMEGN GH
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGH 218



 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +1

Query: 46  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 225
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 226 EQTRPPRIV 252
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>BC139843-1|AAI39844.2|  389|Homo sapiens UPB1 protein protein.
          Length = 389

 Score =  118 bits (285), Expect = 1e-26
 Identities = 52/87 (59%), Positives = 64/87 (73%)
 Frame = +3

Query: 240 PENCQVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 419
           P    VG++Q+ I +P + PV EQ  A+  ++K I++VA   GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 420 TREKQPWCEFAESAEDGPTTTFLRELA 500
           TREK PW EFAESAEDGPTT F ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score =  106 bits (254), Expect = 8e-23
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 512 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGH 688
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHIPRVGDFNES YYMEGN GH
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGH 218



 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +1

Query: 46  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 225
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 226 EQTRPPRIV 252
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>BC131703-1|AAI31704.1|  384|Homo sapiens UPB1 protein protein.
          Length = 384

 Score =  118 bits (285), Expect = 1e-26
 Identities = 52/87 (59%), Positives = 64/87 (73%)
 Frame = +3

Query: 240 PENCQVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 419
           P    VG++Q+ I +P + PV EQ  A+  ++K I++VA   GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 420 TREKQPWCEFAESAEDGPTTTFLRELA 500
           TREK PW EFAESAEDGPTT F ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score =  106 bits (254), Expect = 8e-23
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 512 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGH 688
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHIPRVGDFNES YYMEGN GH
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGH 218



 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +1

Query: 46  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 225
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 226 EQTRPPRIV 252
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>AF169559-1|AAF06739.1|  387|Homo sapiens beta-ureidopropionase
           protein.
          Length = 387

 Score =  118 bits (285), Expect = 1e-26
 Identities = 52/87 (59%), Positives = 64/87 (73%)
 Frame = +3

Query: 240 PENCQVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 419
           P    VG++Q+ I +P + PV EQ  A+  ++K I++VA   GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 420 TREKQPWCEFAESAEDGPTTTFLRELA 500
           TREK PW EFAESAEDGPTT F ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score =  106 bits (254), Expect = 8e-23
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 512 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGH 688
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHIPRVGDFNES YYMEGN GH
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGH 218



 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +1

Query: 46  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 225
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 226 EQTRPPRIV 252
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>AF163312-1|AAF06735.1|  384|Homo sapiens beta-ureidopropionase
           protein.
          Length = 384

 Score =  118 bits (285), Expect = 1e-26
 Identities = 52/87 (59%), Positives = 64/87 (73%)
 Frame = +3

Query: 240 PENCQVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 419
           P    VG++Q+ I +P + PV EQ  A+  ++K I++VA   GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 420 TREKQPWCEFAESAEDGPTTTFLRELA 500
           TREK PW EFAESAEDGPTT F ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score =  106 bits (254), Expect = 8e-23
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 512 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGH 688
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHIPRVGDFNES YYMEGN GH
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGH 218



 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +1

Query: 46  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 225
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 226 EQTRPPRIV 252
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


>AB013885-1|BAA88634.1|  384|Homo sapiens beta-ureidopropionase
           protein.
          Length = 384

 Score =  118 bits (285), Expect = 1e-26
 Identities = 52/87 (59%), Positives = 64/87 (73%)
 Frame = +3

Query: 240 PENCQVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFC 419
           P    VG++Q+ I +P + PV EQ  A+  ++K I++VA   GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 420 TREKQPWCEFAESAEDGPTTTFLRELA 500
           TREK PW EFAESAEDGPTT F ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score =  106 bits (254), Expect = 8e-23
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 512 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGH 688
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHIPRVGDFNES YYMEGN GH
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNESTYYMEGNLGH 218



 Score = 30.7 bits (66), Expect = 5.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +1

Query: 46  ETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXFPAKD 225
           E  SLE  +  +L   DL+E  R+ +G+    ++ L   +               F A +
Sbjct: 5   EWKSLEECLEKHLPLPDLQEVKRVLYGKELR-KLDLPREAFEAASREDFELQGYAFEAAE 63

Query: 226 EQTRPPRIV 252
           EQ R PRIV
Sbjct: 64  EQLRRPRIV 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,675,754
Number of Sequences: 237096
Number of extensions: 2069279
Number of successful extensions: 9292
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9282
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)