Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30260
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82278-9|CAE17877.1| 323|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z82070-8|CAE17980.1| 323|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z70680-5|CAA94574.1| 402|Caenorhabditis elegans Hypothetical pr... 31 0.72
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 29 2.2
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 29 2.2
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 2.9
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 2.9
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 28 6.7
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 28 6.7
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 28 6.7
U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine rece... 28 6.7
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 28 6.7
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 28 6.7
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 28 6.7
AF000198-5|AAB53053.1| 381|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z82278-9|CAE17877.1| 323|Caenorhabditis elegans Hypothetical
protein W04E12.9 protein.
Length = 323
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 82 FYNLPSARRFYLILNQFTRKENNSYLHTIRGH-HSNHNAEVS 204
FY+ PS+ Y+ L+ F + + + R H NH++EVS
Sbjct: 14 FYDHPSSHNLYIYLHLFVQSNTTTIISNFRKQKHENHSSEVS 55
>Z82070-8|CAE17980.1| 323|Caenorhabditis elegans Hypothetical
protein W04E12.9 protein.
Length = 323
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 82 FYNLPSARRFYLILNQFTRKENNSYLHTIRGH-HSNHNAEVS 204
FY+ PS+ Y+ L+ F + + + R H NH++EVS
Sbjct: 14 FYDHPSSHNLYIYLHLFVQSNTTTIISNFRKQKHENHSSEVS 55
>Z70680-5|CAA94574.1| 402|Caenorhabditis elegans Hypothetical
protein C25G4.8 protein.
Length = 402
Score = 31.1 bits (67), Expect = 0.72
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = -2
Query: 626 KEIKHALSHIKIISCEQFVRARKLITIAVVVYTASSFVYLYAVIKFILSNPSSISKDFLR 447
++I + + + I QF + +V Y A F+ ++ + L S ++FLR
Sbjct: 313 EDIMYVCNMLIIADDAQFANVQNCCIATLVFYHAHDFIRIFVIGNHPLKERFSRRQEFLR 372
Query: 446 ASSVCPPDERYASSNE 399
S +A+SNE
Sbjct: 373 PSLTMQVKRAFAASNE 388
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 265 SKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVYHSLLLAYLSSGGQTEE 444
S + E L + + F L+L N ++ FSP S+ +L L ++++ G+T +
Sbjct: 2 SDSSSDEKMGLLLHSETDFGLSLLRQQNLT---ESFVFSPLSIALALSLVHVAAKGETRD 58
Query: 445 ALRKSL 462
+RK+L
Sbjct: 59 EIRKAL 64
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 265 SKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVYHSLLLAYLSSGGQTEE 444
S + E L + + F L+L N ++ FSP S+ +L L ++++ G+T +
Sbjct: 2 SDSSSDEKMGLLLHSETDFGLSLLRQQNLT---ESFVFSPLSIALALSLVHVAAKGETRD 58
Query: 445 ALRKSL 462
+RK+L
Sbjct: 59 EIRKAL 64
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 241 PVLLQDDSSKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVY-HSLLLAY 417
PVL + S N + N QL LN ND +PD + F F + HS+ L
Sbjct: 343 PVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQKHSISLRM 402
Query: 418 LSSGGQTEEALRKSLE 465
S E + +LE
Sbjct: 403 NRSSDLPELFVPPTLE 418
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 241 PVLLQDDSSKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVY-HSLLLAY 417
PVL + S N + N QL LN ND +PD + F F + HS+ L
Sbjct: 343 PVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQKHSISLRM 402
Query: 418 LSSGGQTEEALRKSLE 465
S E + +LE
Sbjct: 403 NRSSDLPELFVPPTLE 418
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 241 PVLLQDDSSKKLNPEARTALYNGQLGFTLNLFNTINDAVPDDNIFFSPFSVY-HSLLLAY 417
PVL + S N + N QL LN ND +PD + F F + HS+ L
Sbjct: 343 PVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQKHSISLRM 402
Query: 418 LSSGGQTEEALRKSLE 465
S E + +LE
Sbjct: 403 NRSSDLPELFVPPTLE 418
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 364 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 462
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 364 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 462
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 364 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 462
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 3 protein.
Length = 332
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 176 IIRTTMLRCLIVVLFVVSTVTSQCFYKMTLLKS*IR-RRGPLCITAS 313
+++ T++ +++ V +TVT FYKMT +K I+ LCI A+
Sbjct: 189 LMQFTLIILTVLITMVTTTVT---FYKMTTMKKRIKASERALCIAAA 232
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 364 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 462
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 364 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 462
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 364 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 462
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AF000198-5|AAB53053.1| 381|Caenorhabditis elegans Hypothetical
protein T28F2.1 protein.
Length = 381
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -3
Query: 121 ELGKIVEHLEDYRIXYYFVMNNDTVCFKKN 32
E+G + + ++++I F+ ++ CFKKN
Sbjct: 328 EIGDVTKRADNFKIKLNFIFFSNKNCFKKN 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,327,831
Number of Sequences: 27780
Number of extensions: 289457
Number of successful extensions: 779
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -