Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30256
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.44 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.2  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 218 RVFATIDLVKAFNQIPVFEDDIPKTAITTPFGLFEXPYMTIGLRNASRTFQNFVD 54
           R  +TIDL  ++ QIP+  +    TA       +    +  GL+ A  +F   +D
Sbjct: 389 RYMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMD 443


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 416 HNVTKFDNYL-IFYSYILHIFIQNVL 490
           H V  F NY+  FY  +L++    +L
Sbjct: 150 HTVEYFQNYIHFFYQLLLYLITDMIL 175


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 255 YQDFAHSLPTWLSCICYHRLG*SI*SNTCF 166
           YQ F +++  WL     H +G  + S  CF
Sbjct: 776 YQMFEYAIGHWLQKATEHVIGCVLCSPGCF 805


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 255 YQDFAHSLPTWLSCICYHRLG*SI*SNTCF 166
           YQ F +++  WL     H +G  + S  CF
Sbjct: 776 YQMFEYAIGHWLQKATEHVIGCVLCSPGCF 805


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 255 YQDFAHSLPTWLSCICYHRLG*SI*SNTCF 166
           YQ F +++  WL     H +G  + S  CF
Sbjct: 776 YQMFEYAIGHWLQKATEHVIGCVLCSPGCF 805


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 255 YQDFAHSLPTWLSCICYHRLG*SI*SNTCF 166
           YQ F +++  WL     H +G  + S  CF
Sbjct: 776 YQMFEYAIGHWLQKATEHVIGCVLCSPGCF 805


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 536 TVFLIFVVLLCSASYLI 486
           T+ ++FV +LC + Y++
Sbjct: 288 TLVIVFVFVLCWSPYIV 304


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 363 LNSNFFTISLLPRVNCTHAFFLYI 292
           LN+  FT+  +    CTH  + ++
Sbjct: 34  LNNGKFTVEDIDPTLCTHLIYSFV 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,588
Number of Sequences: 336
Number of extensions: 2815
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)