Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30242
(526 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_29230| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1) 28 5.4
SB_24170| Best HMM Match : rve (HMM E-Value=0.61) 28 5.4
SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1) 28 5.4
SB_1479| Best HMM Match : OTU (HMM E-Value=0.34) 28 5.4
SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13) 28 5.4
SB_37914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_34744| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 5.4
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 28 5.4
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12) 28 5.4
SB_8485| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 27 7.2
SB_8363| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_53267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 190 PVLDCDRRSLCRTWKKESDAWE 255
P LD D R+L W++ ++WE
Sbjct: 8 PELDMDSRNLAEAWREFEESWE 29
>SB_29230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 190 PVLDCDRRSLCRTWKKESDAWE 255
P LD D R+L W++ ++WE
Sbjct: 8 PELDMDSRNLAEAWREFEESWE 29
>SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1)
Length = 175
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 196 LDCDRRSLCRTWKKESDAWE 255
LD D R+L TW++ ++WE
Sbjct: 10 LDIDSRNLAETWREWQESWE 29
>SB_24170| Best HMM Match : rve (HMM E-Value=0.61)
Length = 768
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 196 LDCDRRSLCRTWKKESDAWE 255
LD D R+L TW++ ++WE
Sbjct: 10 LDIDSRNLAETWREWQESWE 29
>SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1)
Length = 175
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 196 LDCDRRSLCRTWKKESDAWE 255
LD D R+L TW++ ++WE
Sbjct: 10 LDIDSRNLAETWREWQESWE 29
>SB_1479| Best HMM Match : OTU (HMM E-Value=0.34)
Length = 554
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 196 LDCDRRSLCRTWKKESDAWE 255
LD D R+L TW++ ++WE
Sbjct: 10 LDIDSRNLAETWREWQESWE 29
>SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13)
Length = 975
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 190 PVLDCDRRSLCRTWKKESDAWE 255
P LD D R+L W++ ++WE
Sbjct: 8 PELDMDSRNLAEAWREFEESWE 29
>SB_37914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 196 LDCDRRSLCRTWKKESDAWE 255
LD D R+L TW++ ++WE
Sbjct: 10 LDIDSRNLAETWREWQESWE 29
>SB_34744| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 296
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 190 PVLDCDRRSLCRTWKKESDAWE 255
P LD D R+L W++ ++WE
Sbjct: 8 PELDLDSRNLAEAWREFEESWE 29
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 190 PVLDCDRRSLCRTWKKESDAWE 255
P LD D R+L W++ ++WE
Sbjct: 664 PELDMDSRNLAEAWREFEESWE 685
>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
Length = 1358
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 190 PVLDCDRRSLCRTWKKESDAWE 255
P LD D R+L W++ ++WE
Sbjct: 8 PELDMDSRNLAEAWREFEESWE 29
>SB_8485| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 257
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 190 PVLDCDRRSLCRTWKKESDAWE 255
P LD D R+L W++ ++WE
Sbjct: 8 PELDMDSRNLVEAWREFEESWE 29
>SB_8363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 369 SSDFASLRSRIGRCSANHLLPCYSXXTIDH 458
SSD A L + + CSA++ +PC T+D+
Sbjct: 574 SSDSAFLEALVPLCSASNNVPCDLRNTLDY 603
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,299,585
Number of Sequences: 59808
Number of extensions: 325296
Number of successful extensions: 945
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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