Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30240
         (619 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9P075 Cluster: HSPC307; n=49; Eumetazoa|Rep: HSPC307 -...   109   5e-23
UniRef50_UPI000023720D Cluster: PREDICTED: similar to DC2 protei...    96   5e-19
UniRef50_Q15ES2 Cluster: Predicted membrane protein-like protein...    74   2e-12
UniRef50_Q54X66 Cluster: Putative uncharacterized protein; n=2; ...    72   1e-11
UniRef50_A7Q6A0 Cluster: Chromosome chr11 scaffold_56, whole gen...    71   2e-11
UniRef50_UPI0000DD798C Cluster: PREDICTED: similar to DC2 protei...    44   0.003
UniRef50_UPI000049A21B Cluster: conserved hypothetical protein; ...    44   0.003
UniRef50_Q5AAT8 Cluster: Potential CCR4-NOT complex associated f...    33   5.5  
UniRef50_Q2BA67 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_Q6CQW5 Cluster: Similar to ca|CA0989|IPF11069 Candida a...    32   9.5  

>UniRef50_Q9P075 Cluster: HSPC307; n=49; Eumetazoa|Rep: HSPC307 -
           Homo sapiens (Human)
          Length = 167

 Score =  109 bits (262), Expect = 5e-23
 Identities = 48/73 (65%), Positives = 59/73 (80%)
 Frame = +3

Query: 36  RICTKSSEMEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDV 215
           R    ++ ME L+ +PF VLE PN+K+KKP WL  PSAMT ++LV++SYFL+TGGIIYDV
Sbjct: 11  RTALAATNMETLYRVPFLVLECPNLKLKKPPWLHMPSAMTVYALVVVSYFLITGGIIYDV 70

Query: 216 IVEPPSVGSTTDE 254
           IVEPPSVGS TDE
Sbjct: 71  IVEPPSVGSMTDE 83



 Score =  104 bits (249), Expect = 2e-21
 Identities = 48/82 (58%), Positives = 58/82 (70%)
 Frame = +2

Query: 254 NGHSRPVAFMPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILLISVAF 433
           +GH RPVAF+  RVNGQYIMEGLA            IILDR++ P  PKLNR LL+ + F
Sbjct: 84  HGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGF 143

Query: 434 LCILVSFFTTWIFMRMKLPGYL 499
           +C+L+SFF   +FMRMKLPGYL
Sbjct: 144 VCVLLSFFMARVFMRMKLPGYL 165


>UniRef50_UPI000023720D Cluster: PREDICTED: similar to DC2 protein;
           n=3; Amniota|Rep: PREDICTED: similar to DC2 protein -
           Homo sapiens
          Length = 147

 Score = 96.3 bits (229), Expect = 5e-19
 Identities = 45/82 (54%), Positives = 54/82 (65%)
 Frame = +2

Query: 254 NGHSRPVAFMPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILLISVAF 433
           +GH RPVAF   RVNGQYIMEGLA            IILD+ + P  PKLNR LL+ + F
Sbjct: 64  HGHQRPVAFFAYRVNGQYIMEGLASSFLFTMGGLGFIILDQLNAPNIPKLNRFLLLFIGF 123

Query: 434 LCILVSFFTTWIFMRMKLPGYL 499
           +C+L+S F   +FMRMKLP YL
Sbjct: 124 VCVLLSIFMARVFMRMKLPSYL 145



 Score = 81.0 bits (191), Expect = 2e-14
 Identities = 42/65 (64%), Positives = 47/65 (72%)
 Frame = +3

Query: 60  MEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDVIVEPPSVG 239
           ME L+ + F VLE PN+K+KKP WL   SAMT  S      FL+TGGIIYDVIVEPPSVG
Sbjct: 1   MEILYHVLFLVLECPNLKLKKPPWLHMLSAMTVCSGG--GVFLITGGIIYDVIVEPPSVG 58

Query: 240 STTDE 254
           S TDE
Sbjct: 59  SMTDE 63


>UniRef50_Q15ES2 Cluster: Predicted membrane protein-like protein;
           n=1; Schistosoma mansoni|Rep: Predicted membrane
           protein-like protein - Schistosoma mansoni (Blood fluke)
          Length = 148

 Score = 74.1 bits (174), Expect = 2e-12
 Identities = 32/64 (50%), Positives = 48/64 (75%)
 Frame = +3

Query: 60  MEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDVIVEPPSVG 239
           M+ + A  F ++E P +KIKKP+++  P  M   S+++LSYFL+TGG+IYD+IV PPS+G
Sbjct: 1   MDCVLAPLFLIVECPRLKIKKPSFVVWPPPMVFLSILILSYFLITGGVIYDMIVGPPSMG 60

Query: 240 STTD 251
           + TD
Sbjct: 61  TETD 64



 Score = 72.9 bits (171), Expect = 6e-12
 Identities = 36/82 (43%), Positives = 49/82 (59%)
 Frame = +2

Query: 257 GHSRPVAFMPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILLISVAFL 436
           G+ +PVA M  R+N QYI+EGLA            I++D+ +     KLNRILL+++   
Sbjct: 67  GNQKPVAIMVWRLNSQYILEGLAASFMFVMGGFGFIVMDKVNEAKVTKLNRILLMALGIG 126

Query: 437 CILVSFFTTWIFMRMKLPGYLQ 502
           CILVS  T  IF+  KLP Y+Q
Sbjct: 127 CILVSLLTLRIFISTKLPSYMQ 148


>UniRef50_Q54X66 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Dictyostelium discoideum AX4
          Length = 433

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 33/65 (50%), Positives = 43/65 (66%)
 Frame = +3

Query: 60  MEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDVIVEPPSVG 239
           ME L  +PF  L+ P +K+K P  +  PS MT FS++  SYFLV+ GIIYD+I  PPS+G
Sbjct: 1   MESLIELPFNFLKCPKMKLKVPN-ISKPSPMTMFSVIFFSYFLVSSGIIYDLIQNPPSIG 59

Query: 240 STTDE 254
              DE
Sbjct: 60  YERDE 64



 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 31/90 (34%), Positives = 46/90 (51%)
 Frame = +2

Query: 236 GFNDR*NGHSRPVAFMPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRIL 415
           G+     G+SRPV F   R+NGQYI+EGL+            IILD        K N   
Sbjct: 59  GYERDERGNSRPVVFQMYRINGQYIIEGLSAGFIFLLGALGYIILD-----LNAKKNNSY 113

Query: 416 LISVAFLCILVSFFTTWIFMRMKLPGYLQN 505
           L ++    I+ ++    +F+RMK+P YL++
Sbjct: 114 LFAIGLALIVATYNIAIVFIRMKIPEYLRD 143


>UniRef50_A7Q6A0 Cluster: Chromosome chr11 scaffold_56, whole genome
           shotgun sequence; n=9; Magnoliophyta|Rep: Chromosome
           chr11 scaffold_56, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 170

 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = +3

Query: 69  LFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDVIVEPPSVGSTT 248
           L  +PF+ L  P +++K P+ L  PS MT ++L+LL+YF+V  GI+YDVIVEPP +GS+ 
Sbjct: 26  LKVLPFSFLHPPRLRLKLPS-LSLPSPMTVYALLLLTYFMVVSGIVYDVIVEPPGIGSSQ 84

Query: 249 D 251
           D
Sbjct: 85  D 85



 Score = 60.1 bits (139), Expect = 4e-08
 Identities = 27/85 (31%), Positives = 46/85 (54%)
 Frame = +2

Query: 245 DR*NGHSRPVAFMPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILLIS 424
           DR  G  RPV F+P RVNGQYI+EGL+            +++D   +    K  ++   S
Sbjct: 85  DRHTGAVRPVVFLPGRVNGQYIIEGLSSGFMFVLGGIGIVLMDLALDRNRAKSVKVSFAS 144

Query: 425 VAFLCILVSFFTTWIFMRMKLPGYL 499
                +++++  + +F+R+K+P YL
Sbjct: 145 AGVASVVIAYVMSMLFIRIKIPAYL 169


>UniRef50_UPI0000DD798C Cluster: PREDICTED: similar to DC2 protein;
           n=1; Homo sapiens|Rep: PREDICTED: similar to DC2 protein
           - Homo sapiens
          Length = 90

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +3

Query: 60  MEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTF-SLVLLSYFLVTGGIIYDVIVEPPSV 236
           ME L+ + F VLE PN+K+KKP WL   SAMT   +L  +S    T G       +PP+ 
Sbjct: 1   MEILYHVLFLVLECPNLKLKKPPWLHMLSAMTILPALPPVSSPPETPG--SQAGFQPPTA 58

Query: 237 GSTTDE 254
           GS++ E
Sbjct: 59  GSSSKE 64


>UniRef50_UPI000049A21B Cluster: conserved hypothetical protein;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
           hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 125

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = +3

Query: 159 FSLVLLSYFLVTGGIIYDVIVEPPSVGSTTDE 254
           FS +L+SY ++  GI YD+I+EPP  GS  D+
Sbjct: 14  FSFILVSYAIIMAGIFYDIIIEPPGTGSVIDK 45


>UniRef50_Q5AAT8 Cluster: Potential CCR4-NOT complex associated
           factor Caf130p; n=1; Candida albicans|Rep: Potential
           CCR4-NOT complex associated factor Caf130p - Candida
           albicans (Yeast)
          Length = 898

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -3

Query: 305 TDH*HDSA*RLQVCCVHFIGR*THARWLDYHIVNNTSSNQK 183
           +DH HD    LQV  +++IG+   AR L + I N  + N+K
Sbjct: 698 SDHLHDYTNELQVLLINWIGKVPEARRLFFKIKNGNTENKK 738


>UniRef50_Q2BA67 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
           protein - Bacillus sp. NRRL B-14911
          Length = 566

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 198 GIIYDVIVEPPSVGSTTDEMDTADL*PSCRIVLMVSTSWK 317
           G ++D+++ P   G   DE D   L    R + MV   WK
Sbjct: 343 GQLFDIVIYPKDAGEPIDEKDMLKLFEDDRFIYMVRKGWK 382


>UniRef50_Q6CQW5 Cluster: Similar to ca|CA0989|IPF11069 Candida
           albicans unknown function; n=1; Kluyveromyces
           lactis|Rep: Similar to ca|CA0989|IPF11069 Candida
           albicans unknown function - Kluyveromyces lactis (Yeast)
           (Candida sphaerica)
          Length = 218

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 149 GRRSLKPCWFLNFYVWNFQNCKRYCK*PFHFTAFGTNPHL 30
           G+ ++     +N YVW  Q+CK YCK        G N HL
Sbjct: 97  GKVAIHSDLLMNSYVWIGQDCKVYCKKLGSRVVLGANTHL 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,131,201
Number of Sequences: 1657284
Number of extensions: 12896188
Number of successful extensions: 27601
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27598
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)