Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30240
         (619 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-596|AAF51116.3|  149|Drosophila melanogaster CG9662-PA ...   113   1e-25
AY070777-1|AAL48399.1|   75|Drosophila melanogaster AT03617p pro...    96   4e-20
AE014134-2551|AAS64743.1|  702|Drosophila melanogaster CG33310-P...    29   6.6  

>AE014134-596|AAF51116.3|  149|Drosophila melanogaster CG9662-PA
           protein.
          Length = 149

 Score =  113 bits (273), Expect = 1e-25
 Identities = 53/83 (63%), Positives = 61/83 (73%)
 Frame = +2

Query: 254 NGHSRPVAFMPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILLISVAF 433
           +GHSRPVAFMP RVNGQYIMEGLA            II+D+TH P    LNR+LL ++ F
Sbjct: 66  HGHSRPVAFMPYRVNGQYIMEGLASSFLFTVGGLGFIIMDQTHTPGKTNLNRLLLTAMGF 125

Query: 434 LCILVSFFTTWIFMRMKLPGYLQ 502
           + ILVSFFTTW+FMRMKLP YLQ
Sbjct: 126 IFILVSFFTTWLFMRMKLPSYLQ 148



 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 38/65 (58%), Positives = 51/65 (78%)
 Frame = +3

Query: 60  MEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDVIVEPPSVG 239
           +E L+ +PF +L  PNIK+++ + +  PS M  FS++L SYFLVTGGIIYDVIVEPPS+G
Sbjct: 2   IETLYNLPFHILVPPNIKVRRFS-IPMPSPMAVFSVILFSYFLVTGGIIYDVIVEPPSLG 60

Query: 240 STTDE 254
           +T DE
Sbjct: 61  ATVDE 65


>AY070777-1|AAL48399.1|   75|Drosophila melanogaster AT03617p
           protein.
          Length = 75

 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 45/74 (60%), Positives = 52/74 (70%)
 Frame = +2

Query: 281 MPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILLISVAFLCILVSFFT 460
           MP RVNGQYIMEGLA            II+D+TH P    LNR+LL ++ F+ ILVSFFT
Sbjct: 1   MPYRVNGQYIMEGLASSFLFTVGGLGFIIMDQTHTPGKTNLNRLLLTAMGFIFILVSFFT 60

Query: 461 TWIFMRMKLPGYLQ 502
           TW+FMRMKLP YLQ
Sbjct: 61  TWLFMRMKLPSYLQ 74


>AE014134-2551|AAS64743.1|  702|Drosophila melanogaster CG33310-PA
           protein.
          Length = 702

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 127 HG-FKLRLP*QPFHWCYSLTFWLLEVLFTM 213
           HG +KLR   +P HW Y+L F +L +LF +
Sbjct: 419 HGKYKLR---RPSHWLYTLVFSVLYILFVI 445


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,760,639
Number of Sequences: 53049
Number of extensions: 600851
Number of successful extensions: 1511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)