Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30238
(680 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 42 5e-06
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 1.8
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 23 3.1
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 4.0
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 4.0
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 4.0
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 5.3
AY052395-1|AAL15469.1| 76|Tribolium castaneum tryptophan oxyge... 21 7.1
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.1
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.1
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 21 7.1
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 21 7.1
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 21 9.3
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 9.3
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 41.9 bits (94), Expect = 5e-06
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +1
Query: 196 LLFVSNDSKLGSYSWSPAR*YYYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVW 375
+L + ++ G ++ PA Y+++++A N G SE T + P PP S+ V
Sbjct: 947 VLVPGDQTEAGVFTLRPAT-TYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRVE 1005
Query: 376 AHDPTTLRVVWRYVQPTNEE--EPLLGYKVRLWELDQDMSTANDTID 510
+D +L V W+ P EE +LGY V + D +T++
Sbjct: 1006 TNDQHSLVVYWK--PPAREEWNGDILGYYVGYRLANSDKPYLFETVE 1050
Score = 39.9 bits (89), Expect = 2e-05
Identities = 31/101 (30%), Positives = 42/101 (41%)
Frame = +1
Query: 157 QVLETGEQRRGVHLLFVSNDSKLGSYSWSPAR*YYYVKVMAFNSAGEGPESERYLERTFR 336
+ +E G + H L +SN L +Y+ Y V V AFN G GP S+ T
Sbjct: 1047 ETVEFGREEGKEHHLKISN---LKTYT------QYSVVVQAFNKVGAGPLSDDIKAYTAE 1097
Query: 337 KAPQKPPASVNVWAHDPTTLRVVWRYVQPTNEEEPLLGYKV 459
P++PP T+RV W T + GYKV
Sbjct: 1098 GVPEQPPDKATCTTLTAQTIRVSWVSPPLTAANGVIKGYKV 1138
Score = 28.7 bits (61), Expect = 0.047
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 561 SYNLRVLAYSNGGDGRMSSP 620
+Y++ VLAY++GGDG ++P
Sbjct: 1172 NYSMEVLAYTSGGDGVRTTP 1191
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
Frame = +1
Query: 586 TPTAATAGCPPQ-PSP 630
+PTA G PPQ PSP
Sbjct: 264 SPTAGAGGLPPQVPSP 279
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -2
Query: 640 PIWKAMVGEDILPSPPLE*ASTRRLYDLP 554
P+ + + +LP+ P + +++YD+P
Sbjct: 286 PVIDSWATQPVLPTHPYQIIKNKQVYDVP 314
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -2
Query: 640 PIWKAMVGEDILPSPPLE*ASTRRLYDLP 554
P+ + + +LP+ P + +++YD+P
Sbjct: 286 PVIDSWATQPVLPTHPYQMIKNQQVYDVP 314
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -2
Query: 640 PIWKAMVGEDILPSPPLE*ASTRRLYDLP 554
P+ + + +LP+ P + +++YD+P
Sbjct: 286 PVIDSWATQPVLPTHPYQMIKNQQVYDVP 314
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -2
Query: 640 PIWKAMVGEDILPSPPLE*ASTRRLYDLP 554
P+ + + +LP+ P + +++YD+P
Sbjct: 286 PVIDSWATQPVLPTHPYQIIKNQQVYDVP 314
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 437 SSSLVGWTYRHTTRRVVGSW 378
+ LV Y++ TR+V G W
Sbjct: 213 AGGLVNSLYQNATRKVCGVW 232
>AY052395-1|AAL15469.1| 76|Tribolium castaneum tryptophan
oxygenase protein.
Length = 76
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 61 GDQLRRDCGMSSAE 20
GDQL +CGM E
Sbjct: 13 GDQLSEECGMLYGE 26
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 61 GDQLRRDCGMSSAE 20
GDQL +CGM E
Sbjct: 13 GDQLSEECGMLYGE 26
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 61 GDQLRRDCGMSSAE 20
GDQL +CGM E
Sbjct: 13 GDQLSEECGMLYGE 26
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 86 LNVTWNPIDQS 118
+NVTW P+ Q+
Sbjct: 486 INVTWKPVTQN 496
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 86 LNVTWNPIDQS 118
+NVTW P+ Q+
Sbjct: 485 INVTWKPVTQN 495
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +2
Query: 161 YWKQENKEEECIYYLSRTTRN 223
YW+ EE C S +RN
Sbjct: 31 YWQCNTDEETCTRISSTVSRN 51
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -2
Query: 640 PIWKAMVGEDILPSPPLE*ASTRRLYDLP 554
P+ + + +LP+ P + + +YD+P
Sbjct: 286 PVIDSWATQPVLPTHPYQIIKNQLVYDVP 314
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,270
Number of Sequences: 336
Number of extensions: 3346
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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