Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30238
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 46 3e-07
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 46 3e-07
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 43 2e-06
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 8.2
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 8.2
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 8.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.2
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/89 (30%), Positives = 41/89 (46%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTNEEE 438
Y + V A+N G GP SE L +T P PP V A +L+V W+ T+
Sbjct: 1083 YTLVVQAYNQVGSGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNG 1142
Query: 439 PLLGYKVRLWELDQDMSTANDTIDRSSTN 525
+ GYK+ + DM + D ++ T+
Sbjct: 1143 IIQGYKLHYEPILADMWRSVDEMEVRKTS 1171
Score = 29.9 bits (64), Expect = 0.023
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTNEEE 438
Y ++V+A AG S + RT + P PP ++ A + + + W P
Sbjct: 978 YTIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILITWSPPLPELRHG 1037
Query: 439 PLLGYKV 459
+ G+ V
Sbjct: 1038 DIQGFNV 1044
Score = 25.8 bits (54), Expect = 0.38
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTN 429
Y + + + N G P S RT +AP PPA+ + + + TTL V+ +V P N
Sbjct: 1471 YQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFL-SPNSTTL-VLRLHVWPDN 1525
Score = 25.4 bits (53), Expect = 0.51
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 509 SMVSFAVLMSWSSSHNRTLYPSRGSSSLVGWTYRHTT 399
S S ++L+ W S HN G +SL G+T + T
Sbjct: 1414 SSTSSSILLHWKSGHN-------GGASLTGYTLHYRT 1443
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 528 EAYISNIIPGKSYNLRVLAYSNGGDGRMSSPTIAFQIGD 644
E ++ + P Y L V AY+ G G +S P + + D
Sbjct: 1071 ELRLTGLRPYTKYTLVVQAYNQVGSGPLSEPLLTQTMED 1109
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/89 (30%), Positives = 41/89 (46%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTNEEE 438
Y + V A+N G GP SE L +T P PP V A +L+V W+ T+
Sbjct: 1079 YTLVVQAYNQVGSGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNG 1138
Query: 439 PLLGYKVRLWELDQDMSTANDTIDRSSTN 525
+ GYK+ + DM + D ++ T+
Sbjct: 1139 IIQGYKLHYEPILADMWRSVDEMEVRKTS 1167
Score = 29.9 bits (64), Expect = 0.023
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTNEEE 438
Y ++V+A AG S + RT + P PP ++ A + + + W P
Sbjct: 974 YTIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILITWSPPLPELRHG 1033
Query: 439 PLLGYKV 459
+ G+ V
Sbjct: 1034 DIQGFNV 1040
Score = 25.8 bits (54), Expect = 0.38
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTN 429
Y + + + N G P S RT +AP PPA+ + + + TTL V+ +V P N
Sbjct: 1467 YQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFL-SPNSTTL-VLRLHVWPDN 1521
Score = 25.4 bits (53), Expect = 0.51
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 509 SMVSFAVLMSWSSSHNRTLYPSRGSSSLVGWTYRHTT 399
S S ++L+ W S HN G +SL G+T + T
Sbjct: 1410 SSTSSSILLHWKSGHN-------GGASLTGYTLHYRT 1439
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 528 EAYISNIIPGKSYNLRVLAYSNGGDGRMSSPTIAFQIGD 644
E ++ + P Y L V AY+ G G +S P + + D
Sbjct: 1067 ELRLTGLRPYTKYTLVVQAYNQVGSGPLSEPLLTQTMED 1105
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 43.2 bits (97), Expect = 2e-06
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWRYVQPTNEEE 438
Y V V AFN G GP SE + T P++PP T+R+ W +
Sbjct: 1053 YSVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISWMSPPLSAANG 1112
Query: 439 PLLGYKV 459
+ GYKV
Sbjct: 1113 VITGYKV 1119
Score = 41.5 bits (93), Expect = 7e-06
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +1
Query: 208 SNDSKLGSYSWSPAR*YYYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDP 387
S + G ++ PA Y+++++A N G S+ T +AP PP S+ V D
Sbjct: 932 SQQNVAGVFNLRPAT-TYHLRIVAENEIGASDPSDTVTIITAEEAPSGPPTSIRVDDLDQ 990
Query: 388 TTLRVVWRYVQPTNEEEPLLGYKV 459
TL+V W+ + +LGY V
Sbjct: 991 HTLKVTWKPPPREDWNGEILGYYV 1014
Score = 28.7 bits (61), Expect = 0.054
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +3
Query: 561 SYNLRVLAYSNGGDGRMSSP 620
+Y+++VLA+++GGDG S+P
Sbjct: 1151 NYSMQVLAFTSGGDGVKSAP 1170
Score = 28.7 bits (61), Expect = 0.054
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 259 YYVKVMAFNSAGEGPESERYLERTFRKAPQKPPASVNVWAHDPTTLRVVWR 411
Y ++V+AF S G+G +S +T + AP+ P A + ++ V WR
Sbjct: 1152 YSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIA-IKALVMSSESILVSWR 1201
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 537 ISNIIPGKSYNLRVLAYSNGG 599
+ +++P Y+LRV A++N G
Sbjct: 1521 VLDLVPATWYHLRVTAHNNAG 1541
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 536 HQQHHSGQVVQPSRAGLLQRRRRQDVL 616
HQQ H G + S + + +++Q VL
Sbjct: 806 HQQSHHGLHINSSPSSVQSGQQQQSVL 832
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 288 SGRRPGKRAILGAHVPQGATEAPGL 362
SG KRA +G H +G +A G+
Sbjct: 247 SGSESFKRARMGFHGMRGKRDAAGI 271
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.4 bits (43), Expect = 8.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 288 SGRRPGKRAILGAHVPQGATEAPGL 362
SG KRA +G H +G +A G+
Sbjct: 247 SGSESFKRARMGFHGMRGKRDAAGI 271
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 354 PGLRQRVGPRPHHP 395
PG +++G RP HP
Sbjct: 83 PGNLEQIGSRPLHP 96
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,686
Number of Sequences: 438
Number of extensions: 4043
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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