Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30237
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 52 6e-07
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 50 1e-06
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 44 9e-05
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 41 8e-04
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 41 0.001
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 40 0.001
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 39 0.003
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 37 0.017
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 35 0.052
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 33 0.21
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 33 0.21
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 33 0.21
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 30 1.5
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 1.5
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 2.0
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 30 2.0
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 30 2.0
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 30 2.0
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 29 4.5
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 7.9
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 7.9
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 7.9
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 7.9
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 7.9
U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 28 7.9
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 7.9
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 7.9
AF067607-7|AAF98613.1| 433|Caenorhabditis elegans Serpentine re... 28 7.9
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 23 9.0
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 23 9.0
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/74 (43%), Positives = 38/74 (51%)
Frame = +2
Query: 260 QMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANH 439
++ P T CP C IVTR V T +F L L GC C +P+C SCKD H
Sbjct: 67 RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126
Query: 440 YCPNCNAYIGSYNR 481
CPNC A IG + R
Sbjct: 127 TCPNCRAMIGVHRR 140
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +2
Query: 284 TSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAY 463
T+C SC + T V + T + +L LI P A +P+C DSCKDA+HYCP CNA
Sbjct: 91 TTCYSCGKYVHTLPKFVIGSLTWI-VFILVLICFFPLAFVPFCLDSCKDAHHYCPRCNAL 149
Query: 464 IGSYNR 481
+G R
Sbjct: 150 LGIKKR 155
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +2
Query: 275 PTNTSCPSCSAAIVTRVDHVP-VTKTHLFALL------LCLIGCCPCACIPYCTDSCKDA 433
P CP C IV+ ++ V V +FA+L L +I C C C+P+ D D
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFC-CVPFFLDQLLDV 101
Query: 434 NHYCPNCNAYIGSYNR 481
NH CP C ++G +NR
Sbjct: 102 NHSCPACKKFLGRFNR 117
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 263 MGPEPTNTSCPSCSAAIVTRVDHVP--VTKTHLFALLLCLIGCCPC--ACIPYCTDSCKD 430
+ P CP C T + V T F +L+ P +P+C ++ KD
Sbjct: 29 LSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKD 88
Query: 431 ANHYCPNCNAYIGSYNR 481
A HYCP+C A+IG+Y R
Sbjct: 89 AEHYCPSCRAWIGTYRR 105
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +2
Query: 284 TSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPY----CTDSCKDANHYCPN 451
T CP+C A +T V+ T + L+C G C C P+ C D KD NH CP+
Sbjct: 34 TYCPTCEKAYMTSVN----THIGVCWWLICFFGTVLC-CFPFLFFLCCDVSKDVNHNCPS 88
Query: 452 CNAYIGSYNR 481
C + NR
Sbjct: 89 CGMLLAKKNR 98
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/70 (35%), Positives = 32/70 (45%)
Frame = +2
Query: 272 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 451
EP CP C+ + TRV+ + L L L P C +C D KD+ H CPN
Sbjct: 65 EPYTEFCPRCNTNVCTRVERT-MGFCSWTMLFLGLFVFFPLLCC-FCLDGFKDSRHSCPN 122
Query: 452 CNAYIGSYNR 481
C + SY R
Sbjct: 123 CGTIL-SYKR 131
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +2
Query: 290 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIG 469
CP C ++ TR H T + + + C P C S KD H+CPNC +
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTMLA 146
Query: 470 SYNR 481
R
Sbjct: 147 CKKR 150
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 290 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC---CPCACIPYCTDSCKDANHYCPNCNA 460
CP C I+T V T + L+C G C I C D KD +H CPNC
Sbjct: 36 CPKCQTTIMTSV----TTHIGMCWWLICFFGTFLFCWPILICLCFDVSKDVDHNCPNCGL 91
Query: 461 YIGSYNR 481
+ + NR
Sbjct: 92 LLATSNR 98
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +2
Query: 287 SCPSCSAAIVTRVDHVPVTKTHLFALL-LCLIGCCPCACIPYCTDSCKDANHYCPNCNAY 463
+C C + TRV+H L A L C CC P KDA H+CPNC +
Sbjct: 62 NCTRCQTLVQTRVEHKIGIMWWLCATLSFCFFFCCYLLFFPIT----KDAQHFCPNCGSL 117
Query: 464 IGSYNR 481
+ R
Sbjct: 118 LAVRTR 123
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +2
Query: 272 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFAL--LLCLIGCCPCACIPY--CTDSCKDANH 439
EP C C VTR T+T L A ++ +IGC I Y C DS KD H
Sbjct: 17 EPHQVFCQKCQCNQVTR------TETQLGACWWVVFIIGCLLFWPICYWLCCDSSKDTMH 70
Query: 440 YCPNCNAYI 466
YCP+C +
Sbjct: 71 YCPSCGTLL 79
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 290 CPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIG 469
C +C + T+ + V + + CL PC + + D +H CPNCN +G
Sbjct: 27 CTNCQETVTTKTEQV-FGMLNFALFITCLF--LPCFIVCFWCRCFMDVHHRCPNCNKSLG 83
Query: 470 SYNR 481
+R
Sbjct: 84 KRDR 87
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +2
Query: 272 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 451
+P CP C +VT V++ L +L+ + + C +DA H+CPN
Sbjct: 11 KPYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPN 68
Query: 452 CNAYIGSYNR 481
C + R
Sbjct: 69 CGMVLSRKKR 78
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 344 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 481
+T LFA L C + PC+ +P S D H CP C+ +G + R
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 344 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 481
+T LFA L C + PC+ +P S D H CP C+ +G + R
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +2
Query: 272 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 451
EP + CP C TR++ A + P C C S KD HYCP+
Sbjct: 17 EPYSEYCPKCQCNHTTRMESRR-GNCWWIAFFIGFFLFFPI-CYWLCCQSSKDTLHYCPS 74
Query: 452 CNAYIGS 472
C + +
Sbjct: 75 CGTLLAT 81
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 9/99 (9%)
Frame = +2
Query: 179 DTARSIPGRSFRRPRAPPAVRYSCPAQQMG-PEPTNTSC-PSCSAAIVTRVDHVP---VT 343
+T + + + P+ PP ++ + QQ+G E +C P C A + P VT
Sbjct: 445 ETTTTTTTTTTQSPQKPPIIKITVTGQQVGCVEQCQPACDPKCIIATIKTPSQQPQFVVT 504
Query: 344 KTHL----FALLLCLIGCCPCACIPYCTDSCKDANHYCP 448
T + CP C P CT C CP
Sbjct: 505 TTQAPPAPAPQQQQQLASCPQLCQPQCTSQCVQ-QQQCP 542
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Frame = +2
Query: 386 CPCACIPYCTDSCKDANHYC-----PNCNAYIGS 472
CP AC P C+ C A + C P+C + GS
Sbjct: 385 CPSACQPSCSQQCIQAQNLCQSACQPSCQSSCGS 418
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 414 RTPAKMQTITVRIAT-RTLEATIAKYF 491
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 414 RTPAKMQTITVRIAT-RTLEATIAKYF 491
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 414 RTPAKMQTITVRIAT-RTLEATIAKYF 491
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 437 RRPAQTQTFPLQLETGQTIECTVAKYF 463
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 414 RTPAKMQTITVRIAT-RTLEATIAKYF 491
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 315 RRPAQTQTFPLQLETGQTIECTVAKYF 341
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 414 RTPAKMQTITVRIAT-RTLEATIAKYF 491
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 334 RRPAQTQTFPLQLETGQTIECTVAKYF 360
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +2
Query: 248 CPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCK 427
CP+ P P + P C + V VPVT T CC C C P CT++C
Sbjct: 79 CPS---APPPCSCGTPGCMQCVQQTV-LVPVTTTT----------CCKC-CQPVCTNACT 123
Query: 428 DANHYCPNC 454
+ C
Sbjct: 124 NGGGCSCGC 132
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 287 SCPSCSAAIVTRVDHVPVTKTHLFALLLC-LIGCCPCACIPYCTDSCKD 430
SC SCSA +V V V+ + + ++ C C+P C +C D
Sbjct: 19 SCSSCSAPVVAPAP-VAVSGYQPYGIAYYPVVPSCTAQCMPTCAPTCVD 66
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 371 CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGS 472
C+I C C +C +S + N CP C A+ G+
Sbjct: 19 CIIECGHSYC-RFCIESHLNINEKCPLCRAHTGN 51
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 472
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 472
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 472
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 472
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 472
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 317 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 356
>U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical
protein F07F6.1 protein.
Length = 428
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 400 TSTWATTY*AKKQSKQVGFSHWHVIYSGDDCRTA*RAASVR 278
T ++T A KQS Q G+ +W +YS DD +T VR
Sbjct: 34 TPAKSSTGAAPKQSSQSGWDYWTRVYS-DDAQTTGTPRDVR 73
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 472
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 356 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 472
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>AF067607-7|AAF98613.1| 433|Caenorhabditis elegans Serpentine
receptor, class t protein59 protein.
Length = 433
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 371 CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR*IFQLVQLILTVKITF*FCYLIL 550
C +G C CI + C D NH P +IG N I ++ T+ F F I+
Sbjct: 255 CWMGSCS-TCILLAANRCSDINHNLPIRKMFIGK-NVYITMMIPATYTIYAMF-FTKPII 311
Query: 551 F 553
F
Sbjct: 312 F 312
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +2
Query: 398 CIPYCTDSCKDANHYCPNCN 457
C P C SC++ + P+ N
Sbjct: 82 CAPACQQSCQNQCQFAPSMN 101
Score = 22.6 bits (46), Expect(2) = 9.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 239 RYSCPAQQMGPEPTNTSC 292
+YSC Q P T+ SC
Sbjct: 49 QYSCSCQNTAPVQTSCSC 66
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +2
Query: 398 CIPYCTDSCKDANHYCPNCN 457
C P C SC++ + P+ N
Sbjct: 83 CAPACQQSCQNQCQFAPSMN 102
Score = 22.6 bits (46), Expect(2) = 9.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 239 RYSCPAQQMGPEPTNTSC 292
+YSC Q P T+ SC
Sbjct: 50 QYSCSCQNTAPVQTSCSC 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,707,666
Number of Sequences: 27780
Number of extensions: 314736
Number of successful extensions: 1094
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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