Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30236
         (420 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    50   2e-05
UniRef50_Q1MH96 Cluster: Putative cell division protein precurso...    33   3.1  
UniRef50_Q01E31 Cluster: Dual specificity phosphatase Cdc25; n=3...    33   3.1  
UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-P...    32   4.1  
UniRef50_Q61F76 Cluster: Putative uncharacterized protein CBG117...    31   7.2  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 23/46 (50%), Positives = 28/46 (60%)
 Frame = +2

Query: 119 YGTGGLLTPLVAPMLXXXXXXXXXXXXXXXXXXYYGNLVAGSIVSR 256
           YGTGGLLTP+VAPML                  YYGN+VAGS++S+
Sbjct: 18  YGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQ 63


>UniRef50_Q1MH96 Cluster: Putative cell division protein precursor;
           n=1; Rhizobium leguminosarum bv. viciae 3841|Rep:
           Putative cell division protein precursor - Rhizobium
           leguminosarum bv. viciae (strain 3841)
          Length = 637

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 332 SWSDVENG*CLASPHGVGATMAAAVNVTQCCRPLNFRSMLVQQ 204
           +W+DV+ G  L+ P G G T  A    T C  PL   S  V Q
Sbjct: 225 TWADVDRGIILSGPPGTGKTTYARALATTCGIPLVLGSAAVWQ 267


>UniRef50_Q01E31 Cluster: Dual specificity phosphatase Cdc25; n=3;
           Ostreococcus|Rep: Dual specificity phosphatase Cdc25 -
           Ostreococcus tauri
          Length = 517

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 347 TEKVRSWSDVENG*CLASPHGVGATMAAAVNVTQCCRPL 231
           T   R+ SD  NG C+    G  A MAAA      CRPL
Sbjct: 216 TPFARALSDASNGRCVDGGQGGAAAMAAAAASAMPCRPL 254


>UniRef50_Q9VUQ9 Cluster: CG6498-PA; n=4; Eumetazoa|Rep: CG6498-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 2139

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +1

Query: 172 LSGNSGRKHSRCCTSILRKFSGRQHCVTLTAAA 270
           LSG+S   HSR  T++LRK S +QH  +L A +
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQHTNSLRAVS 220


>UniRef50_Q61F76 Cluster: Putative uncharacterized protein CBG11746;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG11746 - Caenorhabditis
           briggsae
          Length = 985

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 302 LASPHGVGATMAAAVNVTQCCRPLNFRSMLVQQRL 198
           LA+     A  AAA N  Q   P NF ++L QQRL
Sbjct: 884 LAAAQAAAAAQAAAANRQQQATPQNFEALLQQQRL 918


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,090,818
Number of Sequences: 1657284
Number of extensions: 6437693
Number of successful extensions: 14181
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14121
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)