Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30235
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   4.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   4.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.9  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = +2

Query: 494 PSKQNKSD-HSVDIPKCKTEYNDKQRHYSVDSPSLDTKKKERLNSCSSLPSNIG---NKR 661
           PS Q +   HS D+P   T  + ++  +S  S S  +     L + S  P   G   N R
Sbjct: 22  PSPQQQQQLHSADVPHSSTSQSSRRPQHS--STSASSSSVPTLPTTSGEPRAAGSSSNSR 79

Query: 662 RMSHKI 679
           R S ++
Sbjct: 80  RNSKQL 85


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = +2

Query: 494 PSKQNKSD-HSVDIPKCKTEYNDKQRHYSVDSPSLDTKKKERLNSCSSLPSNIG---NKR 661
           PS Q +   HS D+P   T  + ++  +S  S S  +     L + S  P   G   N R
Sbjct: 22  PSPQQQQQLHSADVPHSSTSQSSRRPQHS--STSASSSSVPTLPTTSGEPRAAGSSSNSR 79

Query: 662 RMSHKI 679
           R S ++
Sbjct: 80  RNSKQL 85


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 515 DHSVDIPKCKTEYN-DKQRHYSVDSPSLDTKKKERLNSCSSLPSNIGNKRR 664
           DH  D      EY  +K R  ++ SP+   K   ++   +  P NI ++ R
Sbjct: 568 DHEGDNDSGVDEYTQEKDRPNALASPASPLKSPSKIPGLARRPENISSESR 618


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +1

Query: 346 SPNQSQKITIITLPNMTKTKIHHSNHVKINMMFLSK*KLKKR 471
           S N      I+  PN  + + HH +H++     + K  L  R
Sbjct: 764 SYNNMNNRRIVPSPNQQQQQQHHHHHLQQQQQIVGKNTLYSR 805


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,034
Number of Sequences: 2352
Number of extensions: 9969
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)