Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30230
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    24   0.86 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   0.86 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      24   0.86 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.6  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +2

Query: 266 NGYP--DGGEWNPLETEEIEQI 325
           NG P  DG +W P+  EEI  I
Sbjct: 462 NGSPNVDGPDWKPISKEEIHFI 483


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +2

Query: 266 NGYP--DGGEWNPLETEEIEQI 325
           NG P  DG +W P+  EEI  I
Sbjct: 462 NGSPNVDGPDWKPISKEEIHFI 483


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +2

Query: 266 NGYP--DGGEWNPLETEEIEQI 325
           NG P  DG +W P+  EEI  I
Sbjct: 464 NGSPNVDGPDWKPISKEEIHFI 485


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 536 TNNIIELKRYFFINKYMC 483
           ++ ++EL+R F  +KY+C
Sbjct: 94  SSQLVELEREFHRSKYLC 111


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 536 TNNIIELKRYFFINKYMC 483
           ++ ++EL+R F  +KY+C
Sbjct: 114 SSQLVELEREFHRSKYLC 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,644
Number of Sequences: 336
Number of extensions: 3110
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)