Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30229
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 31 0.88
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.2
SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28) 30 1.5
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 30 1.5
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.5
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.5
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 29 2.7
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.6
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 3.6
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_50536| Best HMM Match : Mycobact_memb (HMM E-Value=5.3) 29 4.7
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56) 28 6.2
SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56) 28 6.2
SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8) 28 6.2
SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56) 28 6.2
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 28 8.2
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.2
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.2
>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 300 VPPAAALVHWQGLRPGVMGSVGGLWSGARQQTSMYDEHGPL 178
+P A L+H Q L + +VG + +G +QT + HG L
Sbjct: 848 LPALALLIHHQDLDTAALRAVGNIVTGTDEQTQVVLNHGAL 888
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 31.1 bits (67), Expect = 0.88
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 445 GGSLIHPNVVLTAAHYVAAAK 507
GGSLIH N VLTAAH +++ +
Sbjct: 418 GGSLIHSNWVLTAAHCISSKR 438
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 445 GGSLIHPNVVLTAAHYVAAAK 507
GGSLIHP VLTA H V++ +
Sbjct: 691 GGSLIHPQWVLTATHCVSSRR 711
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 436 YVGGGSLIHPNVVLTAAHYVAAA 504
++ GGSL+ P V+TAAH +A +
Sbjct: 91 FICGGSLVSPTWVVTAAHCIAGS 113
>SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)
Length = 234
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 300 VPPAAALVHWQGLRPGVMGSVGGLWSGARQQTSMYDEHGPLPTLI 166
+P A L+H Q L + +VG + +G +QT + G +P +I
Sbjct: 185 LPALALLIHHQDLDTAALRAVGNIVTGTDEQTQEVIDAGLIPLII 229
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 445 GGSLIHPNVVLTAAH 489
GGSLIHP VLTAAH
Sbjct: 287 GGSLIHPEWVLTAAH 301
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 349 KFGEFPWMVAILKVEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYVAAAKD 510
K G +PW +++ V P ++ GGS++ P ++TAAH A +KD
Sbjct: 111 KKGAWPWQISMNYVHNKVTKTP-------HICGGSVVAPEWIVTAAHCFAYSKD 157
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 445 GGSLIHPNVVLTAAH 489
GGSLIHP VLTAAH
Sbjct: 247 GGSLIHPEWVLTAAH 261
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 445 GGSLIHPNVVLTAAHYVA 498
GGSLIHP +LTA H V+
Sbjct: 81 GGSLIHPQWILTATHCVS 98
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +1
Query: 268 LPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILKVEPVDDNEPEGQKLNVYVGG 447
+P CG R P A R G D GE+PW ++ P+ G K G
Sbjct: 196 VPSVPNCGVRPP---ASRIVGGNDA--MHGEWPWQAMLMFQTPL------GYK---QFCG 241
Query: 448 GSLIHPNVVLTAAHYV 495
G+L+H + V+TA+H +
Sbjct: 242 GALVHEDWVVTASHCI 257
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 183 ARVHRTSTSAVWLPTRDRQQIPSRQAGDPANEPGLRLAEP*RRCLPDH 326
A VH+ +T L + RQ++PS AG +N+ RL +P RR P +
Sbjct: 537 ATVHQYNTHGKGLTIQRRQRVPSELAGSDSNQSTPRL-KP-RRAQPQN 582
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 376 AILKVEPVDDNEPEGQK--LNVYVGGGSLIHPNVVLTAAHYV 495
A L V P+ ++ EG K + G+ IHP V+ HY+
Sbjct: 565 APLSVHPLPPSDTEGAKSAFSTIAKSGTFIHPRVMKPKEHYI 606
>SB_50536| Best HMM Match : Mycobact_memb (HMM E-Value=5.3)
Length = 462
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 197 YIDVCCLAPDQRPP--TDPITPGRR 265
Y+DVCCL D+ P TDP G R
Sbjct: 315 YLDVCCLRQDEFPANITDPQIEGHR 339
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 445 GGSLIHPNVVLTAAHYV 495
GG+L+HP V+TAAH V
Sbjct: 167 GGTLVHPQWVITAAHCV 183
>SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 482 PLTTLPPLRTE--DQSRRMGHAEHEGDISVSRQDSQGNRDTQGLQ*GE 619
P T P R + RR GH + E DI S+ ++TQG+ E
Sbjct: 259 PRTANPDRRVTVMSEQRRTGHVDSEIDIDDHESKSEERQETQGIDGNE 306
>SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 482 PLTTLPPLRTE--DQSRRMGHAEHEGDISVSRQDSQGNRDTQGLQ*GE 619
P T P R + RR GH + E DI S+ ++TQG+ E
Sbjct: 259 PRTANPDRRVTVMSEQRRTGHVDSEIDIDDHESKSEERQETQGIDGNE 306
>SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8)
Length = 929
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 41 GVSTNDDLSCQTSDGQE---GECVNYYLCNAANN-TIITDGTNVIDIRVGSGPCSSYIDV 208
G S DD+S +SDG + G + N ++ ++DG V+ I S S DV
Sbjct: 310 GSSDGDDVSNGSSDGDDVSDGSSDGDDVSNGVSDGDDVSDGDVVVTIDDVSNGASDSDDV 369
Query: 209 CCLAPDQRPPTDPITPGRRPC 271
C +A D D ++ G C
Sbjct: 370 CDVASDGDDVCDGVSGGDDVC 390
>SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 642
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 482 PLTTLPPLRTE--DQSRRMGHAEHEGDISVSRQDSQGNRDTQGLQ*GE 619
P T P R + RR GH + E DI S+ ++TQG+ E
Sbjct: 259 PRTANPDRRVTVMSEQRRTGHVDSEIDIDDHESKSEERQETQGIDGNE 306
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 355 GEFPWMVAILKVEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYV 495
G +PW VA L+ + N N + GG+LI + VLTAAH V
Sbjct: 1170 GGYPWQVA-LEFDTFQSN------YNTFHCGGTLIAEDWVLTAAHCV 1209
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 292 WRNPDG---VAFRTTGDVDGETKFGEFPWMVAILKVEPVDDNEP 414
WR +G VA T GD+ E + PW+V + D NEP
Sbjct: 4088 WRFNEGEGAVAIDTVGDI--EMELASSPWLVPSWEFSDADMNEP 4129
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 436 YVGGGSLIHPNVVLTAAHYV 495
++ GGSLI P VLTAAH V
Sbjct: 61 HICGGSLITPEWVLTAAHCV 80
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 436 YVGGGSLIHPNVVLTAAHYV 495
++ GGSLI P VLTAAH V
Sbjct: 104 HICGGSLITPEWVLTAAHCV 123
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 343 ETKFGEFPWMVAILKVEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAH 489
E K G+FPW +A+L K Y GG+L+H V+T AH
Sbjct: 34 EAKAGQFPWQIALL------------FKRQQYC-GGALVHERWVVTGAH 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,128,836
Number of Sequences: 59808
Number of extensions: 455429
Number of successful extensions: 1438
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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