Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30229
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    28   0.073
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.68 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.68 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   2.7  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   2.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   4.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 0.073
 Identities = 23/73 (31%), Positives = 30/73 (41%)
 Frame = +1

Query: 277 NQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILKVEPVDDNEPEGQKLNVYVGGGSL 456
           N  CGW+NP  +   T       T   EFP M  I +       EP        + G ++
Sbjct: 150 NCNCGWKNPSRIVGGT------NTGINEFPMMAGIKRT-----YEPG------MICGATI 192

Query: 457 IHPNVVLTAAHYV 495
           I    VLTAAH +
Sbjct: 193 ISKRYVLTAAHCI 205


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 69  ARPPTAKKGSASTITCAMRPITPLSLT 149
           +R  T KKG  +T+ C +   TP+++T
Sbjct: 814 SRLVTVKKGDTATLHCEVHGDTPVTVT 840


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 69  ARPPTAKKGSASTITCAMRPITPLSLT 149
           +R  T KKG  +T+ C +   TP+++T
Sbjct: 810 SRLVTVKKGDTATLHCEVHGDTPVTVT 836


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 224 REPDSRRRCTMNTGHC 177
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 224 REPDSRRRCTMNTGHC 177
           R+PD   +C    GHC
Sbjct: 28  RQPDGMNQCQAVNGHC 43


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 207 SAVWLPTRDRQ-QIPSRQAGDPANEPGLRLAEP 302
           +AV +P + +  Q  S+QAGDP +   LR   P
Sbjct: 30  AAVQVPQQTQSVQQQSQQAGDPCDPSLLRQGVP 62


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +3

Query: 78  PTAKKGSASTIT---CAMRPITPLSLTEPTSSI*ESAVARVHRTS 203
           P A  GSAS +T       P+  +S TE T S   +++   H  +
Sbjct: 470 PAASWGSASDVTLDEAVKSPLGSVSSTESTCSGEVASLTEYHHVA 514


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,863
Number of Sequences: 438
Number of extensions: 3675
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)