Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30228
         (518 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.47 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   3.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 324 SWNSVEALLCTVSCCKLSMIDI 259
           SW S++ LLCT S   L  I I
Sbjct: 113 SWVSLDILLCTASILSLCAISI 134


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 321 WNSVEALLCTVSCCKLSMIDI 259
           W S + L CT S   L MI +
Sbjct: 117 WVSFDVLSCTASILNLCMISV 137


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 105 VSTSRSYVIFSLVISDVYNI*LDL 176
           + T+ +Y +FSL ISD+  + L L
Sbjct: 71  MQTATNYYLFSLAISDLILLVLGL 94


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 111 TSRSYVIFSLVISDV 155
           T+ +Y +FSL +SD+
Sbjct: 86  TATNYYLFSLAVSDL 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,299
Number of Sequences: 438
Number of extensions: 2705
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)