Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30225
         (658 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)                  29   3.3  
SB_25345| Best HMM Match : DUF866 (HMM E-Value=2.3)                    28   7.7  

>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
          Length = 841

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 139 RENIARRDSVRDKVRTIDYTLNIFELIFFLYAVRAVC 249
           R+N   R S+R  VR +   + +F   + L A+R++C
Sbjct: 440 RQNSVNRRSIRSSVRVLGAMILLFVFCWVLSAIRSLC 476


>SB_25345| Best HMM Match : DUF866 (HMM E-Value=2.3)
          Length = 257

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -2

Query: 531 HAALIDKCKNKNKVIGYFELPLLDRCSVGSSTNDAYQREQKTNIH*IGQS*TTLCNW 361
           HA+L+    N+ +V       L D C +GS++   YQ +Q T IH    S   +C+W
Sbjct: 206 HASLMHCASNEARV-------LHDHCPIGSTSWCKYQTKQTTPIH---LSTVLVCHW 252


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,695,416
Number of Sequences: 59808
Number of extensions: 273697
Number of successful extensions: 396
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)