Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30220
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_16636| Best HMM Match : EGF (HMM E-Value=7.6e-07) 38 0.009
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 32 0.33
SB_27751| Best HMM Match : Laminin_G_2 (HMM E-Value=1e-06) 32 0.33
SB_31301| Best HMM Match : EGF (HMM E-Value=0.0037) 32 0.33
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_40275| Best HMM Match : Cadherin (HMM E-Value=0) 31 0.75
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_38264| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 30 1.7
SB_29897| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_14014| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 29 4.0
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_30649| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-24) 28 5.3
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 28 5.3
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 28 7.0
SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29) 28 7.0
SB_45840| Best HMM Match : zf-AN1 (HMM E-Value=1.2e-20) 28 7.0
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 28 7.0
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_36327| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17) 27 9.3
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39) 27 9.3
SB_22347| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_11569| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_59039| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_48132| Best HMM Match : CLN3 (HMM E-Value=5.9e-09) 27 9.3
SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26) 27 9.3
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 27 9.3
>SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 38.7 bits (86), Expect = 0.004
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCERICP 320
F C C+GTGYYG+ C+ CP
Sbjct: 112 FRCSCDGTGYYGQTCQNKCP 131
>SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 38.7 bits (86), Expect = 0.004
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCERICP 320
F C C+GTGYYG+ C+ CP
Sbjct: 112 FRCSCDGTGYYGQTCQNKCP 131
>SB_16636| Best HMM Match : EGF (HMM E-Value=7.6e-07)
Length = 302
Score = 37.5 bits (83), Expect = 0.009
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 258 GFTCKCEGTGYYGKRCERICPAT 326
GF C C+ TGYYG+ C CP++
Sbjct: 252 GFRCLCQQTGYYGQHCHERCPSS 274
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 267 CKCEGTGYYGKRCER 311
C+CEGTGY GK CE+
Sbjct: 742 CECEGTGYEGKICEK 756
>SB_27751| Best HMM Match : Laminin_G_2 (HMM E-Value=1e-06)
Length = 255
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCER 311
F C CEGTGY GK C++
Sbjct: 238 FECDCEGTGYEGKYCDQ 254
>SB_31301| Best HMM Match : EGF (HMM E-Value=0.0037)
Length = 76
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCER 311
F C CEGTGY GK C++
Sbjct: 59 FECDCEGTGYEGKYCDQ 75
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 31.1 bits (67), Expect = 0.75
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 267 CKCEGTGYYGKRCERICPATAIPGTFFPHEC 359
C+C+ GY+G+ C R CP +A+ + +C
Sbjct: 3086 CQCD-YGYWGRNCSRECPGSALNPCYGHGQC 3115
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 267 CKCEGTGYYGKRCERICPATAIP 335
C+C+ GYYG C ICPA P
Sbjct: 3708 CECKN-GYYGDNCTGICPAITEP 3729
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 240 ADNPGPGFTCKCEGTGYYGKRCERICPATAI 332
AD G CKC+ +GY+G C R CP A+
Sbjct: 1862 ADGDGSE-VCKCD-SGYWGAACSRECPGGAL 1890
>SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 31.1 bits (67), Expect = 0.75
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = +1
Query: 67 CEPNQAQNG--CKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIR-GIC 237
C N +NG CK SC CK E+ T ++C E+ N CS+ PC G+C
Sbjct: 1082 CSKNPCKNGGVCKNEHGGYSCA--CKAEF---TGKNC-----EQDVNECSKNPCKNGGVC 1131
Query: 238 TQTIQDPDSLVNAKAPG-IMEKDVKE 312
A G I E+DV E
Sbjct: 1132 KNEHGGYSCTCKAGFTGKICEQDVNE 1157
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 67 CEPNQAQNG--CKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIR-GIC 237
C QNG CK SC CK E+ T ++C E+ N CS+ PC G+C
Sbjct: 1006 CSKYPCQNGGVCKNEHGGYSCA--CKAEF---TGKNC-----EQDVNECSKNPCKNGGVC 1055
Score = 27.5 bits (58), Expect = 9.3
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 67 CEPNQAQNG--CKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICT 240
C N +NG CK SC CK + T ++C E+ N CS+ PC G
Sbjct: 739 CSENPCKNGGVCKNEHGGYSCA--CKAGF---TGKNC-----EQDVNECSKNPCQNGGVA 788
Query: 241 QTIQDPDSLVNAK 279
+T D+L AK
Sbjct: 789 KT-NMADTLALAK 800
>SB_40275| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1747
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 255 PGFTCKCEGTGYYGKRCE 308
PGF CKC TGY+G CE
Sbjct: 1019 PGFVCKCP-TGYHGPLCE 1035
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 30.7 bits (66), Expect = 1.00
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 264 TCKCEGTGYYGKRCERICPATAIPGTFFPHECIV 365
TC+C GY G RC + ++ F EC++
Sbjct: 95 TCRCH-PGYQGSRCSEVADCSSFGNCSFHGECVI 127
>SB_38264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 252 GPGFTCKCEGTGYYGKRCE-RIC 317
G FTC C Y+G+ C+ RIC
Sbjct: 25 GRNFTCNCTSPAYFGRYCQGRIC 47
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 231 HMHADNPGPGFTCKCEGTGYYGKRC 305
H +N F C C GTG+ G RC
Sbjct: 2799 HGKCNNTIGSFACDCSGTGFTGARC 2823
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 258 GFTCKCEGTGYYGKRCERICPATAIPGTFFP 350
G+TC C GY G RCE + + G++ P
Sbjct: 1004 GYTCTC-APGYTGSRCEMLDEVSFRRGSYMP 1033
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCERI 314
+ C C G GYYGK+CE +
Sbjct: 1826 YNCTCPG-GYYGKQCETV 1842
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 CEPNQAQNG--CKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICT 240
C N NG C+ N+ +C C + T R+CL+ + E C PC+ G C
Sbjct: 2754 CLSNPCGNGATCRHLVNNYTCI--CAVGF---TGRNCLDDINE-----CGSDPCVHGKCN 2803
Query: 241 QTI 249
TI
Sbjct: 2804 NTI 2806
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 258 GFTCKCEGTGYYGKRCERICPATAIPGTFF 347
G+ C C+ TGYYG+ C C G F
Sbjct: 1689 GYKCSCK-TGYYGENCTLACSTEVDIGFLF 1717
>SB_29897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 82 AQNGCKIYGNSCSCGYGCKTEYIYRTRRSCL 174
AQ+GCK++ N+C K + YRTR+ L
Sbjct: 6 AQDGCKLHVNACLGRGKAKAFFFYRTRQKNL 36
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 267 CKCEGTGYYGKRCER 311
C+CE TGY GK CE+
Sbjct: 2324 CECEETGYEGKLCEK 2338
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCERIC 317
F+C+C GY GKRC +C
Sbjct: 1932 FSCRCR-PGYVGKRCTNVC 1949
>SB_14014| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCERIC 317
FTC C GY G RCE+ C
Sbjct: 86 FTCIC-AVGYIGARCEKAC 103
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 264 TCKCEGTGYYGKRCERICPA 323
+C C GY+G C+R CPA
Sbjct: 643 SCNC-AAGYHGNACDRPCPA 661
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 258 GFTCKCEGTGYYGKRCE 308
GF CKC GY+G RCE
Sbjct: 210 GFKCKCP-FGYFGNRCE 225
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 22 GILAAVACFQLGVWACEPNQAQNG--CKIYG--NSCSCGYG 132
G+ + A + V AC+PN NG C +G +SC C G
Sbjct: 233 GLYSLSATYVSTVTACQPNPCLNGGLCSRFGTQHSCQCARG 273
>SB_30649| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-24)
Length = 463
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 142 QFYNRNHNCTSYRIFCTHSEPDWAH 68
Q +N +H C++ RI +HSEP+ H
Sbjct: 155 QEHNISHECSNKRITGSHSEPEKIH 179
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 28.3 bits (60), Expect = 5.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 267 CKCEGTGYYGKRC 305
C C GTG+YG +C
Sbjct: 230 CDCSGTGFYGNQC 242
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -1
Query: 284 GAFAFTSESGSWI--VCVHMPRMQGVREHMFEL 192
G F + E+G++I +CVH+ + G+ HM EL
Sbjct: 205 GVFWVSCEAGTYIRTLCVHIGLLMGIGAHMQEL 237
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 252 GPGFTCKCEGTGYYGKRCERIC 317
G F C C TG+ G CE C
Sbjct: 3639 GDLFNCNCTSTGFTGPTCEEPC 3660
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 238 TQTIQDPDSLVNAKAP-GIMEKDVKESVQLQQYQERSSHMSASLSNND 378
T TI+D DSL++ ++P ++E K +V +++ + + S+S ND
Sbjct: 1398 TVTIEDDDSLISVESPVEVLEDAGKANVVVKRTGNTKTRQTFSVSVND 1445
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Frame = +1
Query: 61 WACEPNQAQNGCKIYGNSCSCGYGCK----TEYIYRTRRSCLNALRERSSNICSRTPCIR 228
W PN C+ N C G CK T Y+ + E + +C PCI
Sbjct: 263 WTHVPNCHTGTCQ--SNPCGRGL-CKELTRTTYMCICKEGFTGTHCETGTPLCLPNPCIN 319
Query: 229 GICTQT 246
G CT++
Sbjct: 320 GNCTES 325
>SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29)
Length = 214
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 258 GFTCKCEGTGYYGKRCERI 314
GFTCKC+ G+ G RC +
Sbjct: 28 GFTCKCQ-DGFIGDRCHAV 45
>SB_45840| Best HMM Match : zf-AN1 (HMM E-Value=1.2e-20)
Length = 187
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 70 EPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRT---PCIRGICT 240
+P +NGC YGNS + G C + + LR + S+ + T I+G C+
Sbjct: 14 QPTLCRNGCGFYGNSATDGM-CS--------KCWKDVLRRKQSSPTANTGIQASIQGSCS 64
Query: 241 QTIQDPDSLVNAKAP 285
+ D SL A AP
Sbjct: 65 SMMTD-GSLATAAAP 78
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 LGVWACEPNQAQNGCKIYGNSCSCGY-GCKTEYIYRTRRSCLNALRERSSNICSR 213
LG W +P Q +N K + GY Y YR + +ALRE ++ R
Sbjct: 17 LGTWKSKPGQVENAVKF---AIKEGYRHIDCAYAYRNEKEVGDALRELLGSVVER 68
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 27.9 bits (59), Expect = 7.0
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Frame = +1
Query: 67 CEPNQAQNG--CKIYGNS--CSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGI 234
C PN NG C + G + C C G YR R C E C PC+ GI
Sbjct: 53 CLPNPCTNGGLCSVNGTNFLCDCPQG------YRGDR-C-----EVRPGQCITNPCVNGI 100
Query: 235 CTQTIQDPDSLVNAKA---PGIMEKDVKE 312
C + DSL N + PG D+ E
Sbjct: 101 C-----ELDSLGNPRCFCIPGFAGSDIDE 124
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +1
Query: 67 CEPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIR-GICTQ 243
C PN +NG G + GY C T R N+C PC G CT+
Sbjct: 99 CHPNPCRNGGMCTGTTSVTGYQC-------TCREGFKGFDCEEINLCVPNPCKNAGTCTE 151
>SB_36327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VRNMRILGILAAVACFQLGVWACEPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLN- 177
VR +R+ + C + CE K+Y C C G + + + CL
Sbjct: 165 VREVRVYKVYERCVCTRCMRGVCEVRVY----KVY-ERCVCVKGVRDVRVNKVSERCLRG 219
Query: 178 ALRERSSNICSRTPCIRGICTQTIQD 255
A + C T C RG C Q +++
Sbjct: 220 ACVYKVYERCVCTRCTRGACVQGLRE 245
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 VRNMRILGILAAVACFQLGVWACEPNQAQ-NGCKIYGNSCSCGYGCKTEYIYRTRRSCLN 177
VR +R+ + C + AC + K+Y C+C G + +Y+ C+
Sbjct: 308 VREVRVYKVSERCVCTRFTNGACVQGVREVRVYKLY-ERCACVQGVRELRVYKVYERCV- 365
Query: 178 ALRERSSNICSRTPCIRGIC 237
C R C++G+C
Sbjct: 366 ------CTRCMRGACVQGVC 379
>SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17)
Length = 218
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 280 PSHLQVNPGPGLSACICHECKAYGNIC 200
P + +V PGPG S C +C + C
Sbjct: 4 PGYTRVKPGPGFSKCTRCKCNRHSLEC 30
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 264 TCKCEGTGYYGKRCE 308
TC C G+GY G +C+
Sbjct: 338 TCNCPGSGYEGPKCD 352
>SB_22957| Best HMM Match : EGF (HMM E-Value=7e-39)
Length = 201
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 264 TCKCEGTGYYGKRCE 308
TC C G+GY G +C+
Sbjct: 132 TCNCPGSGYEGPKCD 146
>SB_22347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 315 CPATAIPGTFFPHECIVI*Q*LK*DSNISFFLKVN 419
CP + GTF PH V+ + D IS ++KV+
Sbjct: 224 CPTLLVTGTFSPHGDDVVESNSRLDPKISEYMKVS 258
>SB_11569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 261 FTCKCEGTGYYGKRCE 308
+TC C+GT Y G CE
Sbjct: 304 YTCDCQGTFYEGATCE 319
>SB_59039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -1
Query: 512 NYRKYYYIAYNTQCQYEYYKNIVMKNYFIFHIYF 411
NY YYY Y Y YY Y+ ++ Y+
Sbjct: 15 NYAYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 48
>SB_48132| Best HMM Match : CLN3 (HMM E-Value=5.9e-09)
Length = 357
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 112 SYRIFCTHSEPDWAHTP 62
SYR+ T+++P W +TP
Sbjct: 214 SYRVIITYAKPSWLYTP 230
>SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26)
Length = 566
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 343 NVPGIAVAGQILSHLFP*YPVPSHLQV 263
N G A AG++L+HL P Y +HL V
Sbjct: 203 NTLGSAPAGELLTHLQPSYWFSAHLHV 229
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 264 TCKCEGTGYYGKRCE 308
TC C G+GY G +C+
Sbjct: 156 TCNCPGSGYEGPKCD 170
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,140,974
Number of Sequences: 59808
Number of extensions: 424609
Number of successful extensions: 1360
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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