Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30219
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    31   0.007
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 31.1 bits (67), Expect = 0.007
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -2

Query: 124 ILPHYILHHFVNIADFHN*NQTEIYCN 44
           ++P+Y + HF+NI D  N N+TEI+ N
Sbjct: 299 LIPNYYIAHFINI-DPENHNKTEIFLN 324


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -2

Query: 208 PIADF*KILHHLSRLHCNYFLLHNFDHKILPHYILH 101
           P A+  K++H L    C + L     HK      LH
Sbjct: 266 PEAEKRKLIHLLQEYRCIFSLRPGLTHKYTHEIKLH 301


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 154 YFLLHNFDHKILPHYILHHFV 92
           YFL+H +   ++   +L HF+
Sbjct: 162 YFLIHWYPRMLISTKLLAHFL 182


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 154 YFLLHNFDHKILPHYILHHFV 92
           YFL+H +   ++   +L HF+
Sbjct: 162 YFLIHWYPRMLISTKLLAHFL 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,820
Number of Sequences: 336
Number of extensions: 1776
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)