Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30219
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p pro...    30   2.6  
AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA ...    30   2.6  
BT011187-1|AAR88548.1|  177|Drosophila melanogaster RE05729p pro...    29   4.5  
AE014297-2891|AAF55822.2|  255|Drosophila melanogaster CG31191-P...    29   4.5  

>AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p
           protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -2

Query: 181 HHLSRL---HCNYFLLHNFDHKILPHYILHHFVNIADFH 74
           HH+  +   H  + + H+ +H I+PH+I HH  +  D H
Sbjct: 227 HHIEHVVPHHIEHVVPHHIEH-IVPHHIDHHLEHHIDHH 264


>AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA
           protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -2

Query: 181 HHLSRL---HCNYFLLHNFDHKILPHYILHHFVNIADFH 74
           HH+  +   H  + + H+ +H I+PH+I HH  +  D H
Sbjct: 227 HHIEHVVPHHIEHVVPHHIEH-IVPHHIDHHLEHHIDHH 264


>BT011187-1|AAR88548.1|  177|Drosophila melanogaster RE05729p
           protein.
          Length = 177

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 47  TINLSLILIMKISNIHKMMKNIMRKNLMIKIMKKEVITMKTR 172
           T   +LI +M      K  +NI ++  M+K+M KEVI ++T+
Sbjct: 77  TAKKALINLMNKYGDSKSQRNIFQRYPMLKLMIKEVIRLETQ 118


>AE014297-2891|AAF55822.2|  255|Drosophila melanogaster CG31191-PA
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 47  TINLSLILIMKISNIHKMMKNIMRKNLMIKIMKKEVITMKTR 172
           T   +LI +M      K  +NI ++  M+K+M KEVI ++T+
Sbjct: 77  TAKKALINLMNKYGDSKSQRNIFQRYPMLKLMIKEVIRLETQ 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,131,232
Number of Sequences: 53049
Number of extensions: 272034
Number of successful extensions: 713
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)