Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30218
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr... 32 0.064
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.34
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.0
SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 2.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.2
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 3.2
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 5.5
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha... 26 5.5
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 7.3
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 25 7.3
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 7.3
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 7.3
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 7.3
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 7.3
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 7.3
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 7.3
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 7.3
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 7.3
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 7.3
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 7.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 9.7
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 25 9.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 9.7
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 25 9.7
>SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr
2|||Manual
Length = 667
Score = 32.3 bits (70), Expect = 0.064
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 338 SKGFPIIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKLEVCYIEANGFYLGKLRGLLGTVT 517
+ G P I+ + ++ P + + + C+ L VC+ A+G ++GK G +
Sbjct: 133 ASGIPTIKAILSGYKYPDMNV----FFSIKTLCSKSLAVCFSVASGLWVGK-EGPFVHIA 187
Query: 518 TSLTMTSGYLMERSALRKASS--VTRTVWPAAV 610
T++ YL+ER A A S TR + AA+
Sbjct: 188 TNII----YLVERIAPSLADSEIFTRQLLAAAM 216
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.34
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +2
Query: 11 ASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 190
+SSSS +P + ++ S + S+ + +SS+ + TSS ST+++S S +
Sbjct: 293 SSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSS 352
Query: 191 ATYWRTTTSIETS 229
+++ TT+S ++S
Sbjct: 353 SSFSSTTSSSKSS 365
Score = 27.1 bits (57), Expect = 2.4
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 17 SSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETVAT 196
SSS + ++ +S S +S+ T LSS+ T ++SS S+ S S + ++
Sbjct: 223 SSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSS 282
Query: 197 YWRTTTSIETSRC*SNFKTETQGS 268
T+++I +S S+ T T +
Sbjct: 283 PTSTSSTISSSSSSSSSPTSTSST 306
Score = 26.6 bits (56), Expect = 3.2
Identities = 23/86 (26%), Positives = 44/86 (51%)
Frame = +2
Query: 11 ASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 190
+SSSS + +IS +S S PT T +SS+ + TS+ ST+++S S +
Sbjct: 264 SSSSSSSSIISSSSSSSSSPTS-------TSSTISSSSSSSSSPTSTSSTISSSSSSSSS 316
Query: 191 ATYWRTTTSIETSRC*SNFKTETQGS 268
+ +++S+ +S S+ T + +
Sbjct: 317 FSSTLSSSSMSSSSSFSSSPTSSSST 342
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P + +TPITS T+
Sbjct: 558 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTV 605
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 509 TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
T+ TS +TS ++ S +SSV + P +TPITS T+
Sbjct: 3209 TLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTV 3257
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 509 TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
T+ TS +TS ++ S +SS+ + P +TPITS T
Sbjct: 3161 TLNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPITSST 3208
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 1446 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 1493
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS ++TS ++ S +S+V T P +TPITS T+
Sbjct: 534 LNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTV 581
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 1158 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTV 1205
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS ++TS ++ S +S+V T P +TPITS T+
Sbjct: 1302 LNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTV 1349
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 1422 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTV 1469
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 1470 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTV 1517
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +SSV T P +TPITS T+
Sbjct: 1974 LNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTV 2021
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS ++TS ++ S +S+V T P +TPITS T+
Sbjct: 2370 LNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTV 2417
Score = 27.1 bits (57), Expect = 2.4
Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 1/213 (0%)
Frame = +2
Query: 20 SSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETVATY 199
+S TP+ SLT+ S P +S + ++S+ ++ T + STV S + T +T
Sbjct: 2563 NSSTPITSLTALNSSTPITS-SSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTA 2621
Query: 200 WRTTTSIETSRC*SNFKTETQGSYFGR*ERSIIELKENGQAILNGASKGFPIIEKDVFAF 379
T+T I TS N T S SI ++LN ++ PI V
Sbjct: 2622 LNTSTPI-TSSSVLNSSTPITSSTALNTSTSI-----TSSSVLNSST---PITSSTVVNT 2672
Query: 380 RQPSNRIGVGSLYGLMVFCTSKLEVCYIEANGFYLGKLRGLLGT-VTTSLTMTSGYLMER 556
P V + + T I ++ T + TS +TS ++
Sbjct: 2673 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNS 2732
Query: 557 SALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
S +S+V T P +TPITS T+
Sbjct: 2733 STPITSSTVVNTSTPITSSSVLNSSTPITSSTV 2765
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS ++TS ++ S +S+V T P +TPITS T+
Sbjct: 2874 LNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTV 2921
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
V TS +TS ++ S +S+V T P +TPITS T
Sbjct: 2898 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 2944
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS ++TS ++ S +S+V T P +TPITS T+
Sbjct: 2970 LNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTV 3017
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
V TS +TS ++ S +S+V T P +TPITS T
Sbjct: 2994 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 3040
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
V TS +TS ++ S +S+V T P +TPITS T
Sbjct: 3258 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 3304
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
V TS +TS ++ S +S+V T P +TPITS T
Sbjct: 2262 VNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 2308
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 1134 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 1181
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 1698 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 1745
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 2310 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTV 2357
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 2478 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 2525
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P +TPITS ++
Sbjct: 2742 VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSV 2789
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +S+V T P +TPITS T+
Sbjct: 2778 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 2825
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +SS+ + P +TPITS T+
Sbjct: 3330 LNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTV 3377
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
+ TS +TS ++ S +S+V T P +TPITS T
Sbjct: 870 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 916
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
+ TS +TS ++ S +S+V T P +TPITS T
Sbjct: 1026 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 1072
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS + S +SSV + P +TPITS T+
Sbjct: 1122 VNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 1169
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V + P +TPITS T+
Sbjct: 1326 VNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTV 1373
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
+ TS +TS ++ S +S+V T P +TPITS T
Sbjct: 1806 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 1852
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCT 652
+ TS +TS ++ S +S+V T P +TPITS T
Sbjct: 1998 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 2044
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS ++TS ++ S +SSV + P +TPITS ++
Sbjct: 2418 VNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSV 2465
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS + S +SSV + P +TPITS T+
Sbjct: 2766 VNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 2813
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +SSV + P +TPITS T+
Sbjct: 450 LNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 497
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V + P +TPITS T+
Sbjct: 786 VNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTV 833
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +S+V T P +TPITS T+
Sbjct: 1170 VNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 1217
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +S+V T P +TPITS T+
Sbjct: 1350 VNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 1397
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +S+V T P +TPITS T+
Sbjct: 1482 VNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 1529
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +S+V T P +TPITS T+
Sbjct: 2190 VNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 2237
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +SS+ + P +TPITS T+
Sbjct: 3102 VNSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTV 3149
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +SS+ + P +TPITS T+
Sbjct: 738 LNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTV 785
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +SSV + P +TPITS ++
Sbjct: 834 VNTSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSV 881
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +S+ T P +TPITS T+
Sbjct: 1002 LNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTV 1049
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+ T P +TPITS T+
Sbjct: 1050 VNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1097
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P +TPITS ++
Sbjct: 1194 VNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSI 1241
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +SS+ + P +TPITS T+
Sbjct: 1218 LNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTV 1265
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V + P +TPITS T+
Sbjct: 1374 VNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTV 1421
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +SSV + P +TPITS T+
Sbjct: 1386 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 1433
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V T P +TPITS ++
Sbjct: 1506 VNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSV 1553
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +SSV + P +TPITS T+
Sbjct: 1518 VNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTV 1565
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+ T P +TPITS T+
Sbjct: 1674 VNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1721
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V + P +TPITS T+
Sbjct: 2214 VNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTV 2261
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +SSV + P +TPITS T+
Sbjct: 2226 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 2273
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+ T P +TPITS T+
Sbjct: 2286 VNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 2333
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V TS +TS ++ S +S+V + P +TPITS T+
Sbjct: 2502 VNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTV 2549
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
V +S +TS ++ S +SSV + P +TPITS T+
Sbjct: 2514 VNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 2561
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 512 VTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTM 655
+ TS +TS ++ S +S+V + P +TPITS T+
Sbjct: 3390 LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTV 3437
>SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 141
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 284 ERSIIELKENGQAILNGASKGFPIIEKDVFAFRQP-SNRIGVGSLYGLMVFCTSKLEVCY 460
+ ++ + NG+ +L+ AS F + K V P N + +FCTS L CY
Sbjct: 62 QEEMVSVSRNGKQLLSEAS--FFRLGKHVHLNFLPFENTFEMALRNDFQIFCTSILFTCY 119
Query: 461 IEA 469
I++
Sbjct: 120 IQS 122
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 49 ILALLRAYRPRSINPLDEVPSKLRAVVV 132
I +L +Y P+ INP +E+P R + +
Sbjct: 9 IYKVLYSYEPQEINPGEEIPENEREISI 36
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 284 ERSIIELKENGQAILNGASKGFPIIEKDVFAFRQ 385
ER I++ K GQ+ LN +EK+V F++
Sbjct: 182 EREILQNKNQGQSTLNSLKDRQQALEKEVNIFKE 215
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 5.5
Identities = 21/46 (45%), Positives = 21/46 (45%)
Frame = +3
Query: 162 SPPHLPRKLSLRIGARPRR*KLHAANPTSKRKPKALILEDKSGVSS 299
SPP LP S R G R L N SK KPK I D VSS
Sbjct: 26 SPP-LP---SRRKGKSALRSALEKKNRKSKSKPKVTITSDTPKVSS 67
>SPAC8C9.06c |||mitochondrial translation regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 931
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 337 SSVQNSLSIFFQFDDTPLLSSKIRALGFRFEVGL 236
+S QNS+ FF D+PL S ++AL + ++ +
Sbjct: 862 ASSQNSIISFFLSPDSPLYFSTLKALRDKLDMAV 895
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 284 ERSIIELKENGQAILNGASKGFPIIEKDVFAF 379
+RS + LKE+G AS+G P++ + V F
Sbjct: 121 QRSKMLLKESGSLGAYSASQGIPLVRRHVADF 152
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 208 DHVDRNFTLLIQLQNGNPRLLFWKIRAEYHRIERKWTGY--SERSF 339
+HV +L +L+N N L+ + + E+H+ + K+ GY SE+ F
Sbjct: 577 EHVKHVKDVLQKLKNAN--LIINQAKCEFHQSQVKFIGYHISEKGF 620
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 9.7
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 14 SSSSCTPVISLTSWPFS-EPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 190
SSSS + T ++ P + + T C + TV+T+S + + S S
Sbjct: 548 SSSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETISTVSTTSTVSESGSSSASIT 607
Query: 191 ATYWRTTTSIETS 229
+TY +T S+ TS
Sbjct: 608 STYPSSTLSMTTS 620
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/36 (27%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 178 PGNCRYVLAHDHVDRNFTLLIQLQ-NGNPRLLFWKI 282
P + RY+L H+HV++ + +L ++ P + +K+
Sbjct: 261 PESPRYLLRHNHVEKVYKILSRIHPEAKPAEIAYKV 296
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 9.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 20 SSCTPVISLTSWPFSEPTDLVAST--H*TKCRLSSALLL*TVNTSSRSTVATSPSQETVA 193
SS TP+ S S + +S+ + T L S+ T +S+ ST ATS S +
Sbjct: 250 SSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLT 309
Query: 194 TYWRTTTSIETS 229
+ TTT+ +S
Sbjct: 310 SVNSTTTTSASS 321
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 17 SSSCTPVISLTSWPFSEPTD 76
S +C+P + T WP ++P+D
Sbjct: 210 SYACSPGMLKTQWPSTQPSD 229
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,717,739
Number of Sequences: 5004
Number of extensions: 54704
Number of successful extensions: 388
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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