Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30218
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.55
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 31 0.55
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical pr... 30 1.7
U21318-3|AAC46667.1| 175|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical p... 29 2.2
AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical... 29 2.2
Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78543-2|CAB01752.1| 369|Caenorhabditis elegans Hypothetical pr... 28 5.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 5.1
U88179-1|AAB52661.3| 216|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 6.8
Z69716-1|CAA93526.1| 486|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.55
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 14 SSSSCTPVISL-TSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 190
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 191 ATYWRTTTSIETSRC*SNFKTETQGSY 271
+T TTT+ E + S+ SY
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSY 384
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.55
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 14 SSSSCTPVISL-TSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 190
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 191 ATYWRTTTSIETSRC*SNFKTETQGSY 271
+T TTT+ E + S+ SY
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSY 384
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 31.5 bits (68), Expect = 0.55
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 20 SSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNT--SSRSTVATSPSQETVA 193
SS T V T +EP ST T+ +++ T T +S ST++T+ + T
Sbjct: 250 SSLTAVPGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTP 309
Query: 194 TYWRTTTSIETS 229
T TTTS TS
Sbjct: 310 TTTTTTTSTTTS 321
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 0.96
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 11 ASSSSCTPVISLTSWPFSEP-TDLVASTH*TKCRLSSALLL*TVNTSSRS-TVATSPSQE 184
AS+S TP +LTS + P T + T T+ S L +TSS + + TSP+
Sbjct: 920 ASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATSTSSSTESTTTSPTTS 979
Query: 185 TVATYWRTTTSIETS 229
T T TTT S
Sbjct: 980 TTTTLPPTTTPYNLS 994
>Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical
protein T02G6.7 protein.
Length = 268
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 88 NPLDEVPSKLRAVVVNG---QHIFTFDGRHLTFPGNCRYV 198
+PLD P K+ + ++N ++ TFDG F NCR++
Sbjct: 77 DPLDLFPMKMESPLINFLDFKYNITFDGEIWNFKYNCRFI 116
>U21318-3|AAC46667.1| 175|Caenorhabditis elegans Hypothetical
protein K03H9.1 protein.
Length = 175
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/90 (20%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +3
Query: 252 RKPKALILEDKSGVSSN*KKMDRLF*TELPKDSRSSKRMCSLSVNQATESVLAHCTVSWS 431
R+ + ++ +SG+ K +L ++P+D K + S+S +A S++ + +
Sbjct: 57 REKIPISVDGRSGLLETFKDKSKLPVEKVPEDVLWEKALDSMSYEEARSSIVQALRENSN 116
Query: 432 SAHLNLRCATLKLTAST---WVNFAVFSER 512
S+ L++R L+ ++ + W+ A+ +++
Sbjct: 117 SSLLHIRACKLEKSSESQYEWIKLALLNDK 146
>Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical
protein F58A4.14 protein.
Length = 443
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 163 RHLTFPGNCRYVLA-HDHVDRNFTLLIQLQNGNPRLLFWKIRAEYH 297
R+ G C ++L H T ++ NP++ +W RA YH
Sbjct: 124 RYFYETGRCNFLLGRHQIAVEQLTKASEVMKDNPKVWYWLARAIYH 169
>AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical
protein Y48C3A.20 protein.
Length = 487
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/97 (21%), Positives = 43/97 (44%)
Frame = +1
Query: 58 LLRAYRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLL 237
L+ RP L VP K+R + + + ++ G+ T + + ++ + + NF+ L
Sbjct: 83 LVSRLRPDFNGTLASVPYKVRNIDGYLKKLGSYSGKRPTLSSDLQLMITFEQEESNFSDL 142
Query: 238 IQLQNGNPRLLFWKIRAEYHRIERKWTGYSERSFQRI 348
LQN P R Y+ + + S++ Q++
Sbjct: 143 QFLQNQFPNDFRVGKRGRYNNNQEAPSSVSKQQLQQV 179
>Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical
protein F46B3.1 protein.
Length = 186
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 26 CTPVISLTSW---PFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSP 175
C P I + W P + + H TKC LS L V T + +T T+P
Sbjct: 88 CPPAICVDQWDNCPLYKLINQCTRYHKTKCPLSCGLCTGNVTTPATTTSTTTP 140
>Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical
protein F35E12.7d protein.
Length = 577
Score = 28.7 bits (61), Expect = 3.9
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 8 GASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTS--SRSTVATSPSQ 181
G + S T V+ S+ + P ST T+ S+A ++ TV ++ S+S V T+ S
Sbjct: 472 GTTQSPGTTVVPSGSFS-TAPIVTSVSTRATRVSSSTAPVVSTVTSTITSQSIVTTNKSS 530
Query: 182 ETVATYWRTTTSIETSRC*SNFKTET 259
+ + +TTTSI T ++ ET
Sbjct: 531 SPITS--KTTTSINTGSTATSVHVET 554
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +1
Query: 70 YRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHDHVDRNFTLLIQLQ 249
Y R N + + + H+ T+DG T PG YVL + L++Q++
Sbjct: 837 YWRRMTNGCQDYRAPAAGYIYGEPHVITYDGIRYTMPGKGYYVLTMSDSPYH-KLMVQVR 895
Query: 250 NGNPRLLFW 276
P W
Sbjct: 896 LEQPDDTLW 904
>Z78543-2|CAB01752.1| 369|Caenorhabditis elegans Hypothetical
protein F29G6.2 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 356 IEKDVFAFRQPSNRIGVGSLYGLM--VFCTSKLEVCYIEANGFYLGKLRGLLGTVTTSLT 529
++KD FRQ + V + G + F T EV +EA+ K +GL + + L
Sbjct: 114 LKKDCKTFRQTIAQFEVEKMGGPVRNSFSTENDEVSKLEAHEKLQAKCKGLESDLRSMLG 173
Query: 530 MTSGYLMERSALRK 571
+ LMER +++
Sbjct: 174 IKEELLMERDEMQR 187
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 5.1
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 8 GASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNT--SSRSTVATSPSQ 181
G+S +S +PV S TS S PT+ ST + LSS + T +T S S+ +TSPS
Sbjct: 1405 GSSKASSSPVPSQTS---STPTNPTGSTE-SSTLLSSTISGSTQHTTMSKASSGSTSPST 1460
Query: 182 ETVATYWRTTTSIETSRC*SNFKTETQ 262
+ T S TS ++ + TQ
Sbjct: 1461 NSQTGSTVTMGSSSTSGVSTSSASSTQ 1487
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 17 SSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETVAT 196
S++ T S+T+ S P+ + ++T S+ + + +S T +T+P+ + +T
Sbjct: 146 SATSTSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPST 205
Query: 197 YWRTTTSIETS 229
TTT+ TS
Sbjct: 206 VQSTTTAEPTS 216
>U88179-1|AAB52661.3| 216|Caenorhabditis elegans Hypothetical
protein R57.2 protein.
Length = 216
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +1
Query: 538 RLPNGKICTSESEF------GNAYRLARSCXQVQAPEHSHH 642
R P GK TSE + G A +L SC Q+ PE HH
Sbjct: 75 RKPLGKCGTSEVNYQPCTSKGIANKLFLSCCQLYVPEECHH 115
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 11 ASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVAT-SPSQET 187
A ++ T S ++ P T T T+ SS + T T++ T +T SPS T
Sbjct: 195 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSST 254
Query: 188 VATYWRTTTSIETS 229
TTT+ ET+
Sbjct: 255 TPVQTTTTTAPETT 268
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 17 SSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATS-PSQETVA 193
++S P S TS P T T T+ SS + T T++ T +T PS T
Sbjct: 129 TTSTEPPSSSTS-PVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSP 187
Query: 194 TYWRTTTSIETS 229
TTT+ ET+
Sbjct: 188 VQTTTTTAPETT 199
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 11 ASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATS-PSQET 187
A ++ T S ++ P T T T+ SS + T T++ T +T PS T
Sbjct: 287 APETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSST 346
Query: 188 VATYWRTTTSIETSR 232
TTT+ ET+R
Sbjct: 347 TPVQTTTTTAPETTR 361
>Z69716-1|CAA93526.1| 486|Caenorhabditis elegans Hypothetical
protein C04B4.1 protein.
Length = 486
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 40 FPDILALLRAYRPRSINP-LDEVPSKLRAVVVNGQHIFTFDGRH 168
F I+A L Y S+ + + +KLR + H+F DG H
Sbjct: 188 FCSIIAQLSLYAENSLKKYIGDSTTKLRVFIERRTHLFRVDGEH 231
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 41 SLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETVATYWRTTTSI 220
S TS P + P +++T SSA +TSS STV+T+ Q T + ++TTS
Sbjct: 450 STTSGPSTTPGSTISTT-------SSASTTSGPSTSSGSTVSTTSGQSTSSGTTKSTTSG 502
Query: 221 ETS 229
T+
Sbjct: 503 PTT 505
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,278,433
Number of Sequences: 27780
Number of extensions: 314663
Number of successful extensions: 993
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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