Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30210
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.2  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -3

Query: 620  SRSCSRSHSQFPPHXQSWRSSRSRGTAVASPG 525
            SRS SRS SQ     +S   SRSR  + AS G
Sbjct: 1128 SRSRSRSRSQSAGSRKSGSRSRSRSGSQASRG 1159


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 427 REKYATIQQLTGQW*KVTMTLKTCRWAY 510
           +E+ ATI+Q   QW     T +  RWA+
Sbjct: 868 QERQATIEQWQQQWDAEADTSRHTRWAH 895


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 483  HCHLSPLTSQLLNRGVFLPYDLEKIFRRGLQQMAPC 376
            H  L+ +   LL      PYD E +  RGLQ+   C
Sbjct: 2575 HVRLAEIAHSLLKVS---PYDRESMACRGLQRYMQC 2607


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,332
Number of Sequences: 2352
Number of extensions: 10199
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)