Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30210
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-1|AAK68186.2| 339|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 29 3.7
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 29 3.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.7
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 29 3.7
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 29 3.7
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 29 3.7
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 29 3.7
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 28 4.9
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 28 4.9
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 28 4.9
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 28 4.9
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 28 4.9
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 28 4.9
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U28739-1|AAK68186.2| 339|Caenorhabditis elegans Hypothetical
protein C17G10.3 protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 294 NLQKAWRRQRKQEKIDRDSRTEQXLEAYTXPSVASPVEISSRGRTGEIRHDSTTDWSMVK 473
+L KA R+++ + RD ++ + PSV E SSR + IR ++S+ K
Sbjct: 50 DLSKAERKEKNNKTARRDVKSSRGNVKTMKPSVVKAEERSSRSKK-SIREGKLKNFSLPK 108
Query: 474 GDNDLEDLPL 503
++++ L L
Sbjct: 109 DESEITALQL 118
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 294 NLQKAWRRQRKQEKIDRDSRTEQXLEAYTXPSVASPVEISSRGRTGEIRHDSTTDWSMVK 473
+L KA R+++ + RD ++ + PSV E SSR + IR ++S+ K
Sbjct: 42 DLSKAERKEKNNKTARRDVKSSRGNVKTMKPSVVKVEERSSRSKK-SIREGKLKNFSLPK 100
Query: 474 GDNDLEDLPL 503
+ ++ L L
Sbjct: 101 DEPEITALQL 110
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 1 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 87
+H L+ D G GNY+ ++DA A G Y
Sbjct: 700 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 728
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 1 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 87
+H L+ D G GNY+ ++DA A G Y
Sbjct: 715 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 743
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 1 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 87
+H L+ D G GNY+ ++DA A G Y
Sbjct: 16526 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 16554
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 1 EHPMLKDDGGEGNYAYRVLDATAPLEGGY 87
+H L+ D G GNY+ ++DA A G Y
Sbjct: 16541 QHHRLQFDDGSGNYSLTIIDAYAEDSGEY 16569
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 433 SPVRPREDISTGLATDGXVYASXSCSVLLSRSIFSC 326
SP+ RE++ + +D +A +C++ S +FSC
Sbjct: 603 SPLLRRENLCSSTTSDSSPFAPFNCTIQQSAFLFSC 638
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 433 SPVRPREDISTGLATDGXVYASXSCSVLLSRSIFSC 326
SP+ RE++ + +D +A +C++ S +FSC
Sbjct: 595 SPLLRRENLCSSTTSDSSPFAPFNCTIQQSAFLFSC 630
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 433 SPVRPREDISTGLATDGXVYASXSCSVLLSRSIFSC 326
SP+ RE++ + +D +A +C++ S +FSC
Sbjct: 603 SPLLRRENLCSSTTSDSSPFAPFNCTIQQSAFLFSC 638
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 433 SPVRPREDISTGLATDGXVYASXSCSVLLSRSIFSC 326
SP+ RE++ + +D +A +C++ S +FSC
Sbjct: 603 SPLLRRENLCSSTTSDSSPFAPFNCTIQQSAFLFSC 638
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 799 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 856
Query: 337 LTGTAE 354
T E
Sbjct: 857 FTTKGE 862
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 402 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 459
Query: 337 LTGTAE 354
T E
Sbjct: 460 FTTKGE 465
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 762 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 819
Query: 337 LTGTAE 354
T E
Sbjct: 820 FTTKGE 825
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 274 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 331
Query: 337 LTGTAE 354
T E
Sbjct: 332 FTTKGE 337
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 799 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 856
Query: 337 LTGTAE 354
T E
Sbjct: 857 FTTKGE 862
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 402 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 459
Query: 337 LTGTAE 354
T E
Sbjct: 460 FTTKGE 465
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 762 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 819
Query: 337 LTGTAE 354
T E
Sbjct: 820 FTTKGE 825
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 274 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 331
Query: 337 LTGTAE 354
T E
Sbjct: 332 FTTKGE 337
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 402 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 459
Query: 337 LTGTAE 354
T E
Sbjct: 460 FTTKGE 465
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 157 GARGPRDARGPKGSLDLMLXMLADVRHXIQNIERAFTKTXKXXNDSISKRLGAANASRRK 336
G RGP+ GPKG + + L D I+ I R K N+ + L N+
Sbjct: 741 GQRGPQGPPGPKGDDGVSMESLTD--DDIERIARRVASIQKESNEPMRGDLPEYNSKVHS 798
Query: 337 LTGTAE 354
T E
Sbjct: 799 FTTKGE 804
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 387 SVASPVEISSRGRTGEIRHDSTTDWS 464
S A+ +++ S GR+ +I HDS W+
Sbjct: 18 SEANKIKLKSSGRSADINHDSPCIWN 43
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 387 SVASPVEISSRGRTGEIRHDSTTDWS 464
S A+ +++ S GR+ +I HDS W+
Sbjct: 18 SEANKIKLKSSGRSADINHDSPCIWN 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,721,844
Number of Sequences: 27780
Number of extensions: 237331
Number of successful extensions: 742
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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