Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30209
(686 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 25 0.77
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 4.1
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 22 4.1
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 4.1
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 22 5.4
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 7.2
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.5
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 9.5
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 9.5
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.5
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 24.6 bits (51), Expect = 0.77
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 515 RAPGGTIRAHGVPVRXHGAGRAE-AHGPAVD 604
RAP +RA G GA RA+ A GP D
Sbjct: 275 RAPAPAVRAAGDAAAARGAARADGAGGPLHD 305
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.1
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +2
Query: 383 PSTRRWAPRPSP----SGSTSWTAASYRTCRESPLPSPGTTS 496
PST RP STS AA + +PLPS GTTS
Sbjct: 39 PSTSTAVQRPQAILQVRPSTS-AAADVDGWQVTPLPSDGTTS 79
Score = 21.4 bits (43), Expect = 7.2
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +2
Query: 404 PRPSPSGSTSWTAASYRTCRESPLPSPGTTSRSRARLRAPGGTIRAHGVPVRXHGAGRAE 583
P P + + + + R+ + PLP+P S + + P +RA R G
Sbjct: 120 PMPITTDNVAAISGVLRSLLDRPLPAPERPSFEGLKRQNPVKFLRAIEEYGRFFGLDSQR 179
Query: 584 AHGPAVD 604
G A+D
Sbjct: 180 LLGVAMD 186
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 372 LGGPGDQRRAXVGDG 328
LG PGD A +G G
Sbjct: 149 LGSPGDASNASIGSG 163
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 372 LGGPGDQRRAXVGDG 328
LG PGD A +G G
Sbjct: 305 LGSPGDASNASIGSG 319
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 550 ACXXSWRWTCRSPWAR 597
A +WRW C+S + +
Sbjct: 20 ALNGAWRWECKSNYCQ 35
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 518 APGGTIRAHGVPVRXHGAGRAEAHGPAVDP 607
APGG + + + A A+GP+ DP
Sbjct: 256 APGGDSQQAALNYSTLASAVASANGPSQDP 285
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/39 (23%), Positives = 18/39 (46%)
Frame = +2
Query: 383 PSTRRWAPRPSPSGSTSWTAASYRTCRESPLPSPGTTSR 499
P+T+ + +P+G T+ T R ++ P+ R
Sbjct: 295 PNTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANNNDKR 333
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.5
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +3
Query: 543 TVCLXGFMALDVPKPMGPLWILGDVFIGKYYTEFRRGERQLG 668
TVCL F + P+ +L V Y E +R Q+G
Sbjct: 333 TVCLCLFGGKVNDESTQPMLVLNSVSADVYNLEIQRFIHQIG 374
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.5
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +3
Query: 543 TVCLXGFMALDVPKPMGPLWILGDVFIGKYYTEFRRGERQLG 668
TVCL F + P+ +L V Y E +R Q+G
Sbjct: 333 TVCLCLFGGKVNDESTQPMLVLNSVSADVYNLEIQRFIHQIG 374
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/39 (23%), Positives = 18/39 (46%)
Frame = +2
Query: 383 PSTRRWAPRPSPSGSTSWTAASYRTCRESPLPSPGTTSR 499
P+T+ + +P+G T+ T R ++ P+ R
Sbjct: 295 PNTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANNNDKR 333
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,791
Number of Sequences: 336
Number of extensions: 2880
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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