Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30205
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 130 4e-30
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 130 4e-30
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 130 4e-30
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 130 4e-30
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 130 4e-30
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 130 4e-30
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 128 1e-29
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 103 6e-22
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 88 2e-17
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 130 bits (314), Expect = 4e-30
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNS 434
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S
Sbjct: 89 GTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDS 148
Query: 435 TIRFPLPKRVHHYKRLNTFAYKRP 506
I+FPLP RV + F KRP
Sbjct: 149 KIKFPLPHRVLRRQHKPRFTTKRP 172
Score = 106 bits (255), Expect = 5e-23
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +1
Query: 4 GQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 183
G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 184 XXXXXXXXXXXXNFGIWLRYESRS 255
NFGIWLRY+SRS
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRS 88
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 130 bits (314), Expect = 4e-30
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNS 434
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S
Sbjct: 89 GTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDS 148
Query: 435 TIRFPLPKRVHHYKRLNTFAYKRP 506
I+FPLP RV + F KRP
Sbjct: 149 KIKFPLPHRVLRRQHKPRFTTKRP 172
Score = 106 bits (255), Expect = 5e-23
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +1
Query: 4 GQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 183
G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 184 XXXXXXXXXXXXNFGIWLRYESRS 255
NFGIWLRY+SRS
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRS 88
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 130 bits (314), Expect = 4e-30
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNS 434
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S
Sbjct: 89 GTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDS 148
Query: 435 TIRFPLPKRVHHYKRLNTFAYKRP 506
I+FPLP RV + F KRP
Sbjct: 149 KIKFPLPHRVLRRQHKPRFTTKRP 172
Score = 106 bits (255), Expect = 5e-23
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +1
Query: 4 GQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 183
G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 184 XXXXXXXXXXXXNFGIWLRYESRS 255
NFGIWLRY+SRS
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRS 88
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 130 bits (314), Expect = 4e-30
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNS 434
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S
Sbjct: 89 GTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDS 148
Query: 435 TIRFPLPKRVHHYKRLNTFAYKRP 506
I+FPLP RV + F KRP
Sbjct: 149 KIKFPLPHRVLRRQHKPRFTTKRP 172
Score = 106 bits (255), Expect = 5e-23
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +1
Query: 4 GQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 183
G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 184 XXXXXXXXXXXXNFGIWLRYESRS 255
NFGIWLRY+SRS
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRS 88
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 130 bits (314), Expect = 4e-30
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNS 434
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S
Sbjct: 89 GTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDS 148
Query: 435 TIRFPLPKRVHHYKRLNTFAYKRP 506
I+FPLP RV + F KRP
Sbjct: 149 KIKFPLPHRVLRRQHKPRFTTKRP 172
Score = 106 bits (255), Expect = 5e-23
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +1
Query: 4 GQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 183
G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 184 XXXXXXXXXXXXNFGIWLRYESRS 255
NFGIWLRY+SRS
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRS 88
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 130 bits (314), Expect = 4e-30
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNS 434
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S
Sbjct: 89 GTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDS 148
Query: 435 TIRFPLPKRVHHYKRLNTFAYKRP 506
I+FPLP RV + F KRP
Sbjct: 149 KIKFPLPHRVLRRQHKPRFTTKRP 172
Score = 106 bits (255), Expect = 5e-23
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +1
Query: 4 GQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 183
G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 5 GTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYC 64
Query: 184 XXXXXXXXXXXXNFGIWLRYESRS 255
NFGIWLRY+SRS
Sbjct: 65 GQVFEKSPLRVKNFGIWLRYDSRS 88
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 128 bits (310), Expect = 1e-29
Identities = 59/84 (70%), Positives = 65/84 (77%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNS 434
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I + CRRP VKQFH+S
Sbjct: 53 GTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSKCRRPAVKQFHDS 112
Query: 435 TIRFPLPKRVHHYKRLNTFAYKRP 506
I+FPLP RV + F KRP
Sbjct: 113 KIKFPLPHRVLRRQHKPRFTTKRP 136
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 103 bits (246), Expect = 6e-22
Identities = 47/84 (55%), Positives = 59/84 (70%)
Frame = +1
Query: 4 GQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 183
G LREY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 5 GTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYC 64
Query: 184 XXXXXXXXXXXXNFGIWLRYESRS 255
NFGIWLR +SRS
Sbjct: 65 GQVFEKSPLRVKNFGIWLRCDSRS 88
Score = 85.4 bits (202), Expect = 1e-16
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +3
Query: 255 GVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAA 395
G HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+ VE I A+
Sbjct: 89 GTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMMVEEIAAS 135
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 88.2 bits (209), Expect = 2e-17
Identities = 42/62 (67%), Positives = 47/62 (75%)
Frame = +3
Query: 321 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 500
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 501 RP 506
RP
Sbjct: 61 RP 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,959,505
Number of Sequences: 237096
Number of extensions: 1768120
Number of successful extensions: 4039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4039
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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