Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30204
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 71 1e-12
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 65 5e-11
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 60 2e-09
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 59 3e-09
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 56 2e-08
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 56 4e-08
03_05_0049 - 20277234-20277251,20277670-20277795,20278085-202781... 54 9e-08
04_04_0385 - 24858580-24858721,24858772-24858850,24859155-248593... 54 2e-07
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 51 1e-06
02_04_0575 - 24000191-24000302,24000710-24000788,24001017-240011... 50 2e-06
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 46 3e-05
10_08_0151 - 15229235-15229243,15230032-15230103,15230369-152304... 45 7e-05
07_01_0023 - 154119-154541,154697-154741,154875-154922,156104-15... 34 0.10
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 31 1.3
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 29 2.9
03_06_0105 + 31675083-31675313,31676171-31676815 29 3.9
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 29 5.1
08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103... 28 6.7
04_04_1294 - 32424762-32426309 28 6.7
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 70.5 bits (165), Expect = 1e-12
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
I++QVEYYF D NL D+FL + +K + G+VP+ ++ F R+ KL++D +I AL
Sbjct: 91 IVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEAALR-- 148
Query: 433 TSGLLEVSEDNKKVRRNPEQPLPEMTRSFVKK 528
TS L VS D K+VRR PLP + VKK
Sbjct: 149 TSSKLVVSPDGKRVRR--LHPLPNNELNDVKK 178
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I+ QVEYYF D NL D FL+ + + GWVP+ + FNRL K+T D +I AL +
Sbjct: 332 ILTQVEYYFSDSNLDHDNFLKSLMD-EHGWVPISKVADFNRLKKMTTDIQLIVEAL--AN 388
Query: 436 SGLLEVSEDNKKVR 477
S LLEV + N + R
Sbjct: 389 SSLLEVQDGNMRRR 402
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
I +QVEYYF D+NL + L I D +G+VP+ ++ FN++ L + ++A AL
Sbjct: 123 ITKQVEYYFSDINLATTEHLMRFITKDPEGYVPITVIAGFNKIKALVHNNSMLAAALR-- 180
Query: 433 TSGLLEVSEDNKKVRR 480
TS L VS+D K+V+R
Sbjct: 181 TSSKLVVSDDGKRVKR 196
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
+++Q+EYYF D NL +D FL+ + D GWVPL ++ FN++ KLT + I + +ST
Sbjct: 311 LLKQIEYYFSDDNLCKDIFLRRHMD-DQGWVPLPLIAGFNQVKKLTNNVQFILETVLQST 369
Query: 436 SGLLEVSEDNKKVRRNPE 489
++EV D + R E
Sbjct: 370 --VVEVQGDKLRKRERWE 385
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQE-QIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
+++QVE+YF DVNL + L + I+ +G+VP+ ++ F ++ +L + +A L
Sbjct: 111 VVKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAVLR-- 168
Query: 433 TSGLLEVSEDNKKVRR 480
TS L VS+D K+VRR
Sbjct: 169 TSAELVVSDDGKRVRR 184
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 55.6 bits (128), Expect = 4e-08
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
++ +VEYYF D+NL + L I D +G+VP+ ++ F ++ L + ++A+AL
Sbjct: 145 VVPKVEYYFSDINLATTEHLMRFITKDPEGYVPISVVAGFKKIKALIQSNAMLASALR-- 202
Query: 433 TSGLLEVSEDNKKVRRNPEQPLPE 504
TS L VS D +V+R EQP E
Sbjct: 203 TSSKLVVSNDGTRVKR--EQPFTE 224
>03_05_0049 -
20277234-20277251,20277670-20277795,20278085-20278153,
20278233-20278280,20278413-20278494,20278583-20278662,
20278764-20278835,20278912-20279006,20280396-20280477,
20280604-20280963
Length = 343
Score = 54.4 bits (125), Expect = 9e-08
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
II+QVEY F D NL + FL + + D + +VP+ +++ + ++ + ++ NAL
Sbjct: 117 IIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVNALR-- 174
Query: 433 TSGLLEVSEDNKKVRRNPEQPLPE 504
TS L VS+D KKVRR QP E
Sbjct: 175 TSSKLVVSDDGKKVRR--AQPFTE 196
>04_04_0385 -
24858580-24858721,24858772-24858850,24859155-24859302,
24859939-24860239,24860327-24860407,24860727-24860875,
24861073-24861215,24861404-24861556,24861664-24861742,
24861851-24861916
Length = 446
Score = 53.6 bits (123), Expect = 2e-07
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAK-LTEDTDVIANALNK 429
++RQVE+YF D NL RD FL++ + + +DG V L ++ F+R+ K L D DV + +
Sbjct: 19 VLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDLDVKQETMPE 78
Query: 430 ST----------SGLLEVSEDNKKVRRNPE 489
T S L V+ED KKV R+ E
Sbjct: 79 ETVLAVAEVLRRSSALRVTEDGKKVGRSIE 108
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/75 (33%), Positives = 46/75 (61%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
+++Q+E+YF NL D FL+ + D GWV + ++ FN++ + T+D I + + +
Sbjct: 239 LLKQIEFYFSKDNLCTDVFLRRNMD-DQGWVNIALIAGFNKVQESTDDLQYIKDTI--QS 295
Query: 436 SGLLEVSEDNKKVRR 480
S +LE+ +D K+RR
Sbjct: 296 SSILEMQDD--KIRR 308
>02_04_0575 -
24000191-24000302,24000710-24000788,24001017-24001164,
24001704-24002100,24002188-24002268,24002688-24002836,
24003152-24003294,24003643-24003795,24003912-24003990,
24004113-24004175
Length = 467
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRL-------AKLTEDT--- 402
++RQVE+YF D NL RDKFL+E + + +DG V L ++ F R+ A + +T
Sbjct: 18 VLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARMKSHLGLDAAVKPETVPE 77
Query: 403 -DVIANALNKSTSGLLEVSEDNKKVRRNPE 489
V+A A S +L +SED K V R E
Sbjct: 78 ETVLAVAEVLRRSQMLRISEDGKMVGRASE 107
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +1
Query: 265 QVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLA 384
Q+E+YF NL D FL+ Q+ D GWV ++++TKFNR A
Sbjct: 427 QIEFYFSTNNLCHDTFLRRQMD-DQGWVHIDVITKFNREA 465
>10_08_0151 -
15229235-15229243,15230032-15230103,15230369-15230459,
15230553-15230695,15231910-15232022,15232171-15232315
Length = 190
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I Q+EYYF + NL D +L+ + GWVPL ++ F R+ LT D + + ++ ST
Sbjct: 125 IREQIEYYFSENNLCSDVYLKGWMN-QQGWVPLTLVAGFPRVQALTTDYETVQRSVLSST 183
>07_01_0023 -
154119-154541,154697-154741,154875-154922,156104-156185,
156365-156444,156606-156677,156827-156921,157479-157515
Length = 293
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 319 EQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 498
+Q + G VPL ++ + ++ L ++ AL ST L VS+D KKVRR QP
Sbjct: 5 QQESISSG-VPLSVIASWKKIKSLGATNQMLVKALRTSTK--LIVSDDGKKVRR--RQPF 59
Query: 499 PE 504
E
Sbjct: 60 TE 61
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +1
Query: 277 YFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 456
Y GD+ +++ KFL Q L DG L L+++N + + + +K+ G L
Sbjct: 116 YSGDIKMNKRKFL--QTLLLDGCFVLVSLSQYNEFLWPDSLRYIPSPSNDKTFEGALSFG 173
Query: 457 EDNKKVRRNPEQPLPEMTRSFVKKYATD 540
+ K RN Q + + +S +K D
Sbjct: 174 DHQKVTGRNESQQVNKGKQSAMKNTQLD 201
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 534 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATF 695
N+ I+ ++A+ +DL +YF +F I+ Y+ K K+ +G F TF
Sbjct: 238 NKKIFVGRLPQEANTEDLRHYFGKFGR----IVDAYIPKDPKRSGHRGFGFVTF 287
>03_06_0105 + 31675083-31675313,31676171-31676815
Length = 291
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/75 (21%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 501 RNDEELRKE-ICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKG 677
+ND + + I + ++ G + ++ DL++YF++F + + ++ R ++T + +G
Sbjct: 99 QNDSVQKNQFIFQKKVFVGGLHETVTVKDLISYFEKFGTITDAVVMR--NRTTNRA--RG 154
Query: 678 SVFATFQTREXGRKV 722
F +F + E K+
Sbjct: 155 FGFISFDSHEAVCKI 169
>03_06_0454 + 34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 373 NRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMTRSFVKKYATD 540
N+L ++V ++A N S SGLL E+ V E PLP S Y D
Sbjct: 1881 NKLKNHFITSEVCSDATNLSASGLLTEEENIHNVEDQYEGPLPSEESSGCLDYPHD 1936
>08_02_0243 -
14708055-14708416,14708487-14709324,14709482-14710323,
14710466-14710520,14711535-14711549,14713030-14713033,
14713340-14713424,14714045-14714084
Length = 746
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 416 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFT 288
F + + S+S RRL +++ + P+S +C+ R+L T
Sbjct: 635 FRLDELDSLSKIRRLLLIKLEKASPPASPVLCNKRHLKELGLT 677
>04_04_1294 - 32424762-32426309
Length = 515
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
R I+ D +D L YF QF E+E + +K+T K KG +++ E R
Sbjct: 230 RKIFVGNVHADVDVDRLYEYFSQFGEIEEGPLG--FDKTTGKP--KGFALFVYKSVESAR 285
Query: 717 KVYE 728
+ E
Sbjct: 286 RALE 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,432,469
Number of Sequences: 37544
Number of extensions: 323757
Number of successful extensions: 921
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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