Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30204
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 126 1e-28
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 126 1e-28
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 126 1e-28
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 126 1e-28
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 126 1e-28
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 126 1e-28
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 73 1e-12
BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein do... 64 5e-10
BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein do... 64 5e-10
BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein do... 64 5e-10
AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein. 64 5e-10
AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein. 64 5e-10
M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human ribonucle... 62 2e-09
DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antige... 61 5e-09
AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens ... 60 6e-09
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 58 2e-08
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 58 2e-08
BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein. 55 2e-07
AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens ... 54 4e-07
AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens ... 54 7e-07
X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein. 47 8e-05
BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein. 42 0.002
BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein. 42 0.002
AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein p... 42 0.002
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 42 0.002
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 37 0.066
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 37 0.066
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 37 0.066
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 37 0.066
M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La p... 36 0.15
BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein. 35 0.35
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 35 0.35
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 35 0.35
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 35 0.35
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 35 0.35
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 35 0.35
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 35 0.35
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 35 0.35
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 35 0.35
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 33 1.1
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 33 1.1
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 33 1.1
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 33 1.1
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 33 1.1
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 33 1.1
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 33 1.1
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 33 1.1
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 33 1.1
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 33 1.1
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 33 1.1
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 33 1.1
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 33 1.1
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 33 1.1
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 32 1.9
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 32 1.9
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 32 1.9
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 32 1.9
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 32 1.9
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 32 1.9
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 32 1.9
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 32 1.9
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 32 1.9
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 32 1.9
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 32 1.9
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 32 1.9
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 32 1.9
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 32 1.9
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 32 1.9
Y11215-1|CAA72101.1| 359|Homo sapiens SKAP55 protein. 30 10.0
BC047870-1|AAH47870.1| 358|Homo sapiens src kinase associated p... 30 10.0
AF399708-1|AAO38813.1| 2145|Homo sapiens TRALPUSH protein. 30 10.0
AB046855-1|BAB13461.1| 1435|Homo sapiens KIAA1635 protein protein. 30 10.0
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 126 bits (303), Expect = 1e-28
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 436 SGLLEVSEDNKKVRRNPEQPLPEMTRSF 519
+ L+E+SED K+RR+P +PLPE+T +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 57.2 bits (132), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 510 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFA 689
+E + ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F
Sbjct: 102 DEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFV 156
Query: 690 TFQTREXGRKVYE 728
F + E +K E
Sbjct: 157 VFDSIESAKKFVE 169
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 126 bits (303), Expect = 1e-28
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 436 SGLLEVSEDNKKVRRNPEQPLPEMTRSF 519
+ L+E+SED K+RR+P +PLPE+T +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 57.2 bits (132), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 510 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFA 689
+E + ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F
Sbjct: 102 DEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFV 156
Query: 690 TFQTREXGRKVYE 728
F + E +K E
Sbjct: 157 VFDSIESAKKFVE 169
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 126 bits (303), Expect = 1e-28
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 436 SGLLEVSEDNKKVRRNPEQPLPEMTRSF 519
+ L+E+SED K+RR+P +PLPE+T +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 57.2 bits (132), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 510 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFA 689
+E + ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F
Sbjct: 102 DEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFV 156
Query: 690 TFQTREXGRKVYE 728
F + E +K E
Sbjct: 157 VFDSIESAKKFVE 169
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 126 bits (303), Expect = 1e-28
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 436 SGLLEVSEDNKKVRRNPEQPLPEMTRSF 519
+ L+E+SED K+RR+P +PLPE+T +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 57.2 bits (132), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 510 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFA 689
+E + ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F
Sbjct: 102 DEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFV 156
Query: 690 TFQTREXGRKVYE 728
F + E +K E
Sbjct: 157 VFDSIESAKKFVE 169
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 126 bits (303), Expect = 1e-28
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 436 SGLLEVSEDNKKVRRNPEQPLPEMTRSF 519
+ L+E+SED K+RR+P +PLPE+T +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 57.2 bits (132), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 510 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFA 689
+E + ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F
Sbjct: 102 DEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFV 156
Query: 690 TFQTREXGRKVYE 728
F + E +K E
Sbjct: 157 VFDSIESAKKFVE 169
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 126 bits (303), Expect = 1e-28
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 435
I Q+EYYFGD NL RDKFL+EQIKLD+GWVPLEI+ KFNRL +LT D +VI AL+KS
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSK 76
Query: 436 SGLLEVSEDNKKVRRNPEQPLPEMTRSF 519
+ L+E+SED K+RR+P +PLPE+T +
Sbjct: 77 AELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 57.2 bits (132), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 510 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFA 689
+E + ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F
Sbjct: 102 DEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFV 156
Query: 690 TFQTREXGRKVYE 728
F + E +K E
Sbjct: 157 VFDSIESAKKFVE 169
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 72.9 bits (171), Expect = 1e-12
Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
I +QV+++FGD NLH+D+FL+EQI K DG+V + +L FN++ KLT D +IA AL
Sbjct: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALR-- 95
Query: 433 TSGLLEVSEDNKKVRRNPEQPLPE 504
+S ++E+ + ++RR ++PL E
Sbjct: 96 SSAVVELDLEGTRIRR--KKPLGE 117
>BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 433 TSGLLEVSEDNKKVRRNPEQPL 498
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 433 TSGLLEVSEDNKKVRRNPEQPL 498
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 433 TSGLLEVSEDNKKVRRNPEQPL 498
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 433 TSGLLEVSEDNKKVRRNPEQPL 498
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
++ Q+E+YF D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 433 TSGLLEVSEDNKKVRRNPEQPL 498
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human
ribonucleoprotein (La) mRNA, 3' end. ).
Length = 355
Score = 62.1 bits (144), Expect = 2e-09
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +1
Query: 367 KFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMTRSF 519
+FNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+T +
Sbjct: 1 EFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 51
Score = 57.2 bits (132), Expect = 6e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 510 EELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFA 689
+E + ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F
Sbjct: 49 DEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFV 103
Query: 690 TFQTREXGRKVYE 728
F + E +K E
Sbjct: 104 VFDSIESAKKFVE 116
>DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antigen B
protein.
Length = 48
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVP 351
I Q+EYYFGD NL RDKFL+EQIKLD+GWVP
Sbjct: 17 ICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVP 48
>AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 491
Score = 60.5 bits (140), Expect = 6e-09
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IIRQVEYYFGDVNLHRDKFLQEQIKLDD-GWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
++ Q+E+ F D NL +D FL + ++ + G+V +++LT F ++ LT D A+AL S
Sbjct: 96 LVDQIEFCFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYS 155
Query: 433 TSGLLEVSEDNKKVRRNPEQPL 498
+LE++ED++KVRR PL
Sbjct: 156 V--VLELNEDHRKVRRTTPVPL 175
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 WIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
+I RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 329 YIKRQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDS 387
Query: 433 TSGLLEVSEDNKKVRRNPEQ-PLP 501
++E+ ++ + R PE+ PLP
Sbjct: 388 K--VVEIVDEKVRRREEPEKWPLP 409
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 WIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
+I RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 406 YIKRQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDS 464
Query: 433 TSGLLEVSEDNKKVRRNPEQ-PLP 501
++E+ ++ + R PE+ PLP
Sbjct: 465 K--VVEIVDEKVRRREEPEKWPLP 486
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 WIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
+I RQ+EYYF NL RD FL+ ++ DG++P+ ++ F+R+ LT D +I AL S
Sbjct: 406 YIKRQIEYYFSVDNLERDFFLRRKMDA-DGFLPITLIASFHRVQALTTDISLIFAALKDS 464
Query: 433 TSGLLEVSEDNKKVRRNPEQ-PLP 501
++E+ ++ + R PE+ PLP
Sbjct: 465 K--VVEIVDEKVRRREEPEKWPLP 486
>BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein.
Length = 335
Score = 55.2 bits (127), Expect = 2e-07
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 WIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
+I RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I AL S
Sbjct: 218 YIKRQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEALKDS 276
Query: 433 TSGLLEVSEDNKKVRRNPEQ-PLP 501
T +E+ ++ + + PE+ P+P
Sbjct: 277 TE--VEIVDEKMRKKIEPEKWPIP 298
>AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ10378 fis, clone NT2RM2002004, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 328
Score = 54.4 bits (125), Expect = 4e-07
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 WIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
+I RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I AL S
Sbjct: 24 YIKRQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEALKDS 82
Query: 433 TSGLLEVSEDNKKVRRNPEQ-PLP 501
T +E+ ++ + PE+ P+P
Sbjct: 83 TE--VEIVDEKMRKEIEPEKWPIP 104
>AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens
cDNA FLJ35445 fis, clone SMINT2003551, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 575
Score = 53.6 bits (123), Expect = 7e-07
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 WIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 432
+I RQ+EYYF NL RD FL+ ++ + G++P+ ++ F R+ LT + ++I L S
Sbjct: 171 YIKRQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILEVLKDS 229
Query: 433 TSGLLEVSEDNKKVRRNPEQ-PLP 501
T +E+ ++ + + PE+ P+P
Sbjct: 230 TE--VEIVDEKMRKKIEPEKWPIP 251
>X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein.
Length = 296
Score = 46.8 bits (106), Expect = 8e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 543 IYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGRKV 722
+Y KGF DA+LDD+ + + +V N+ MRR + K+ FKGS+F F + E +K
Sbjct: 1 LYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKA-----FKGSIFVVFDSIESAKKF 55
Query: 723 YE 728
E
Sbjct: 56 VE 57
>BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein.
Length = 374
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 125 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 181
Query: 442 LLEVSEDNKKVR 477
+++V E +KVR
Sbjct: 182 MVQVDEKGEKVR 193
>BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein.
Length = 188
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 55 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 111
Query: 442 LLEVSEDNKKVR 477
+++V E +KVR
Sbjct: 112 MVQVDEKGEKVR 123
>AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein
protein.
Length = 375
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 55 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 111
Query: 442 LLEVSEDNKKVR 477
+++V E +KVR
Sbjct: 112 MVQVDEKGEKVR 123
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+Q+E+ F NL +D +L Q+ D ++P+ + + KLT D D+I L +S
Sbjct: 55 KQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTDPDLILEVLR--SSP 111
Query: 442 LLEVSEDNKKVR 477
+++V E +KVR
Sbjct: 112 MVQVDEKGEKVR 123
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.066
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 175 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 231
Query: 442 LLEVSEDNKKVRRN 483
L++V E +KVR N
Sbjct: 232 LVQVDEKGEKVRPN 245
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 37.1 bits (82), Expect = 0.066
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 218
Query: 442 LLEVSEDNKKVRRN 483
L++V E +KVR N
Sbjct: 219 LVQVDEKGEKVRPN 232
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 37.1 bits (82), Expect = 0.066
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 218
Query: 442 LLEVSEDNKKVRRN 483
L++V E +KVR N
Sbjct: 219 LVQVDEKGEKVRPN 232
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 37.1 bits (82), Expect = 0.066
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 262 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 441
+ +E+ NL D +L Q+ D +VP+ + + + KL+ D D+I L +
Sbjct: 162 KTLEFCLSRENLASDMYLISQMDSDQ-YVPITTVANLDHIKKLSTDVDLIVEVLR--SLP 218
Query: 442 LLEVSEDNKKVRRN 483
L++V E +KVR N
Sbjct: 219 LVQVDEKGEKVRPN 232
>M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La
protein mRNA, partial cds. ).
Length = 27
Score = 35.9 bits (79), Expect = 0.15
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 448 EVSEDNKKVRRNPEQPLPEMTRSF 519
E+SED K+RR+P +PLPE+T +
Sbjct: 1 EISEDKTKIRRSPSKPLPEVTDEY 24
>BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein.
Length = 151
Score = 34.7 bits (76), Expect = 0.35
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + ++D+ YF+QF +VE+ ++ +K+T + +G F TF+ +
Sbjct: 6 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAML--MFDKTTNRH--RGFGFVTFENEDVVE 61
Query: 717 KVYE 728
KV E
Sbjct: 62 KVCE 65
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 34.7 bits (76), Expect = 0.35
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + ++D+ YF+QF +VE+ ++ +K+T + +G F TF+ +
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAML--MFDKTTNRH--RGFGFVTFENEDVVE 165
Query: 717 KVYE 728
KV E
Sbjct: 166 KVCE 169
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 34.7 bits (76), Expect = 0.35
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + ++D+ YF+QF +VE+ ++ +K+T + +G F TF+ +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAML--MFDKTTNRH--RGFGFVTFENEDVVE 161
Query: 717 KVYE 728
KV E
Sbjct: 162 KVCE 165
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + +++D+ YF+QF +V++ ++ +K+T + +G F TF++ +
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML--MFDKTTNRH--RGFGFVTFESEDIVE 164
Query: 717 KVYE 728
KV E
Sbjct: 165 KVCE 168
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + +++D+ YF+QF +V++ ++ +K+T + +G F TF++ +
Sbjct: 43 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML--MFDKTTNRH--RGFGFVTFESEDIVE 98
Query: 717 KVYE 728
KV E
Sbjct: 99 KVCE 102
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + +++D+ YF+QF +V++ ++ +K+T + +G F TF++ +
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML--MFDKTTNRH--RGFGFVTFESEDIVE 101
Query: 717 KVYE 728
KV E
Sbjct: 102 KVCE 105
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + +++D+ YF+QF +V++ ++ +K+T + +G F TF++ +
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML--MFDKTTNRH--RGFGFVTFESEDIVE 101
Query: 717 KVYE 728
KV E
Sbjct: 102 KVCE 105
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + +++D+ YF+QF +V++ ++ +K+T + +G F TF++ +
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML--MFDKTTNRH--RGFGFVTFESEDIVE 101
Query: 717 KVYE 728
KV E
Sbjct: 102 KVCE 105
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + + +++D+ YF+QF +V++ ++ +K+T + +G F TF++ +
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML--MFDKTTNRH--RGFGFVTFESEDIVE 164
Query: 717 KVYE 728
KV E
Sbjct: 165 KVCE 168
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 161 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 216
Query: 717 KVYE 728
K+ E
Sbjct: 217 KIME 220
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 161 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGLCFITFKEEEPVK 216
Query: 717 KVYE 728
K+ E
Sbjct: 217 KIME 220
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 91 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 146
Query: 717 KVYE 728
K+ E
Sbjct: 147 KIME 150
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 94 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 149
Query: 717 KVYE 728
K+ E
Sbjct: 150 KIME 153
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 174 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 229
Query: 717 KVYE 728
K+ E
Sbjct: 230 KIME 233
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 163 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 218
Query: 717 KVYE 728
K+ E
Sbjct: 219 KIME 222
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G + D + + YF F EVE++ + ++ T KR +G F TF+ E +
Sbjct: 182 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELP--MDNKTNKR--RGFCFITFKEEEPVK 237
Query: 717 KVYE 728
K+ E
Sbjct: 238 KIME 241
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 84 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 139
Query: 717 KVYE 728
K+ E
Sbjct: 140 KLLE 143
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 169
Query: 717 KVYE 728
K+ E
Sbjct: 170 KLLE 173
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 717 KVYE 728
K+ E
Sbjct: 289 KLLE 292
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 717 KVYE 728
K+ E
Sbjct: 289 KLLE 292
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G +A+ + + YF +F E+E + + ++ KR +G VF TF+ E +
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP--MDPKLNKR--RGFVFITFKEEEPVK 209
Query: 717 KVYE 728
KV E
Sbjct: 210 KVLE 213
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 717 KVYE 728
K+ E
Sbjct: 289 KLLE 292
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G +A+ + + YF +F E+E + + ++ KR +G VF TF+ E +
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP--MDPKLNKR--RGFVFITFKEEEPVK 209
Query: 717 KVYE 728
KV E
Sbjct: 210 KVLE 213
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 228 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 283
Query: 717 KVYE 728
K+ E
Sbjct: 284 KLLE 287
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G +A+ + + YF +F E+E + + ++ KR +G VF TF+ E +
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP--MDPKLNKR--RGFVFITFKEEEPVK 209
Query: 717 KVYE 728
KV E
Sbjct: 210 KVLE 213
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G +A+ + + YF +F E+E + + ++ KR +G VF TF+ E +
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP--MDPKLNKR--RGFVFITFKEEEPVK 209
Query: 717 KVYE 728
KV E
Sbjct: 210 KVLE 213
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G +A+ + + YF +F E+E + + ++ KR +G VF TF+ E +
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP--MDPKLNKR--RGFVFITFKEEEPVK 209
Query: 717 KVYE 728
KV E
Sbjct: 210 KVLE 213
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 111 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 166
Query: 717 KVYE 728
K+ E
Sbjct: 167 KLLE 170
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G +A+ + + YF +F E+E + + ++ KR +G VF TF+ E +
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP--MDPKLNKR--RGFVFITFKEEEPVK 209
Query: 717 KVYE 728
KV E
Sbjct: 210 KVLE 213
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ I+ G +A+ + + YF +F E+E + + ++ KR +G VF TF+ E +
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELP--MDPKLNKR--RGFVFITFKEEEPVK 209
Query: 717 KVYE 728
KV E
Sbjct: 210 KVLE 213
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 717 KVYE 728
K+ E
Sbjct: 289 KLLE 292
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 169
Query: 717 KVYE 728
K+ E
Sbjct: 170 KLLE 173
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 717 KVYE 728
K+ E
Sbjct: 289 KLLE 292
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 114 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 169
Query: 717 KVYE 728
K+ E
Sbjct: 170 KLLE 173
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 537 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFQTREXGR 716
+ ++ G + D S + + YF F E+EN+ + ++ T +R +G F T+ E +
Sbjct: 233 KKVFVGGLSPDTSEEQIKEYFGAFGEIENIELP--MDTKTNER--RGFCFITYTDEEPVK 288
Query: 717 KVYE 728
K+ E
Sbjct: 289 KLLE 292
>Y11215-1|CAA72101.1| 359|Homo sapiens SKAP55 protein.
Length = 359
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 564 KDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGS 680
+D ++D++ K QE++NVI + Y+EK +K F GS
Sbjct: 91 QDEGMEDIV---KGAQELDNVIKQGYLEKKSKDHSFFGS 126
>BC047870-1|AAH47870.1| 358|Homo sapiens src kinase associated
phosphoprotein 1 protein.
Length = 358
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 564 KDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGS 680
+D ++D++ K QE++NVI + Y+EK +K F GS
Sbjct: 91 QDEGMEDIV---KGAQELDNVIKQGYLEKKSKDHSFFGS 126
>AF399708-1|AAO38813.1| 2145|Homo sapiens TRALPUSH protein.
Length = 2145
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 373 NRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMTRSFVK 525
++L K+T+D I LNK ++ V ++ +K R+N ++ P + F K
Sbjct: 742 HQLKKITKD---ILKILNKKSTTETGVGDEGQKARKNKQETFPTLETVFTK 789
>AB046855-1|BAB13461.1| 1435|Homo sapiens KIAA1635 protein protein.
Length = 1435
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 373 NRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMTRSFVK 525
++L K+T+D I LNK ++ V ++ +K R+N ++ P + F K
Sbjct: 32 HQLKKITKD---ILKILNKKSTTETGVGDEGQKARKNKQETFPTLETVFTK 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,049,982
Number of Sequences: 237096
Number of extensions: 1804506
Number of successful extensions: 6040
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 5527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5975
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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