Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30200
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 97 1e-20
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 97 1e-20
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 34 0.083
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 30 1.3
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 4.1
U97009-10|AAC69033.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 5.4
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 28 5.4
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 27 7.2
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 27 9.5
U51997-2|AAG24069.1| 332|Caenorhabditis elegans Serpentine rece... 27 9.5
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 96.7 bits (230), Expect = 1e-20
Identities = 38/70 (54%), Positives = 54/70 (77%)
Frame = +1
Query: 13 IWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLE 192
IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D +++ EWGKCL
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254
Query: 193 LDELEMEERC 222
L E E++ERC
Sbjct: 255 LKEGEIQERC 264
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 96.7 bits (230), Expect = 1e-20
Identities = 38/70 (54%), Positives = 54/70 (77%)
Frame = +1
Query: 13 IWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLE 192
IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D +++ EWGKCL
Sbjct: 195 IWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLG 254
Query: 193 LDELEMEERC 222
L E E++ERC
Sbjct: 255 LKEGEIQERC 264
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 33.9 bits (74), Expect = 0.083
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 4 NAAIWKWCDLDAQTNDRFVSRHELFPIRAPLMA---LEHCIAPFLDRCDADDDHRVTLAE 174
+A WK+ L+ N+ + R E P ++ L+ + C CD + D ++T E
Sbjct: 172 SAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDE 230
Query: 175 WGKCL 189
W KC+
Sbjct: 231 WRKCI 235
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 16 WKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRC-DADDDHRVTLAEWGKCLE 192
W + D + + +S+ EL PI E C+ F+D C D D +++ EW C
Sbjct: 83 WMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEWCDCFT 139
Query: 193 L-DELEMEERC 222
D+L E C
Sbjct: 140 FSDDLRHEPPC 150
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 190 ELDELEMEERCDDFNENAE 246
E+++LE E RC NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211
>U97009-10|AAC69033.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein11 protein.
Length = 533
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 270 HHWRTKIVFSVFIEIVAALLHFQLV 196
H++ IVF +F+ I+ A + FQ+V
Sbjct: 494 HYYLDVIVFLIFVSIITAYISFQIV 518
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 106 EHCIAPFLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERC 222
E C+ F+D C D D +++ EW C D+L E C
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPC 158
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 90 SSNGEQLVTGHESIIGLSVQIAPFPYS 10
+++ + + GH ++GLS + FPYS
Sbjct: 1814 AAHSKDQIQGHAGVLGLSAIVLAFPYS 1840
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 568 FFFFFLT-CAVINFHI*FSLYIFYSKDKVIIKSLLQNRL 455
+++ +T CA+I+ + F ++FYS D+V+ LL L
Sbjct: 121 YYYLMVTLCALISLLVTFCKFVFYS-DEVVTNCLLSTAL 158
>U51997-2|AAG24069.1| 332|Caenorhabditis elegans Serpentine
receptor, class h protein19 protein.
Length = 332
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 559 FFLTCAVINFHI*FSLYIFYSKDKVIIKSLLQNRLKCAFSTYEYNI 422
F +TC ++N H + IFY + + I + ++ +Y Y I
Sbjct: 94 FLITCLIVNIHTLYMTEIFYYRYQSCIFNYKTHKFSYFVKSYVYLI 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,148,304
Number of Sequences: 27780
Number of extensions: 194263
Number of successful extensions: 392
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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