SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30199
         (406 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028100-1|AAH28100.1|  589|Homo sapiens KLHL25 protein protein.       29   5.9  
AY764034-1|AAV51405.1|  589|Homo sapiens ENC2 protein.                 29   5.9  
AL136796-1|CAB66730.1|  589|Homo sapiens hypothetical protein pr...    29   5.9  
AK022649-1|BAB14155.1|  438|Homo sapiens protein ( Homo sapiens ...    29   5.9  
DQ084244-1|AAZ31363.1|  758|Homo sapiens polycystic kidney disea...    29   7.8  
BC030991-1|AAH30991.1|  192|Homo sapiens OR7E91P protein protein.      29   7.8  
BC014374-1|AAH14374.1|  167|Homo sapiens OR7E91P protein protein.      29   7.8  

>BC028100-1|AAH28100.1|  589|Homo sapiens KLHL25 protein protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 21  CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 122
           CK+L CY P   +WN +T  + P S+ P +   T
Sbjct: 552 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 583


>AY764034-1|AAV51405.1|  589|Homo sapiens ENC2 protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 21  CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 122
           CK+L CY P   +WN +T  + P S+ P +   T
Sbjct: 552 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 583


>AL136796-1|CAB66730.1|  589|Homo sapiens hypothetical protein
           protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 21  CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 122
           CK+L CY P   +WN +T  + P S+ P +   T
Sbjct: 552 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 583


>AK022649-1|BAB14155.1|  438|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12587 fis, clone NT2RM4001217, moderately
           similar to Mus musculus actin-binding protein (ENC-1)
           mRNA. ).
          Length = 438

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 21  CKSLCCYSPLR*SWNAVTLSSAPASIGPWSTTMT 122
           CK+L CY P   +WN +T  + P S+ P +   T
Sbjct: 401 CKTLDCYDPTSDTWNCIT--TVPYSLIPTAFVST 432


>DQ084244-1|AAZ31363.1|  758|Homo sapiens polycystic kidney disease
           2-like 1 variant protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 78  SSAPASIGPWSTTMTCSTARKCSVRELKTSISACLMYLPY 197
           +S P  +G W TT+T +TA    +  +KT++   L+Y+ +
Sbjct: 25  ASLPCPLGLWGTTLTENTAENREL-YIKTTLRELLVYIVF 63


>BC030991-1|AAH30991.1|  192|Homo sapiens OR7E91P protein protein.
          Length = 192

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 18  SCK-SLCCYSPLR*SWNAVTLSSAPASIGPWSTTMTCSTARKCSVRELKTSISACLMYLP 194
           SC   LCC SP    W ++ LS    ++   S  +  +++  CS      SI  CL++ P
Sbjct: 124 SCAVGLCCNSPSSRMWKSLILSVTHLNLS--SLPVLTASSIACSY----ISIVLCLVFFP 177

Query: 195 YSG 203
           + G
Sbjct: 178 FQG 180


>BC014374-1|AAH14374.1|  167|Homo sapiens OR7E91P protein protein.
          Length = 167

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 18  SCK-SLCCYSPLR*SWNAVTLSSAPASIGPWSTTMTCSTARKCSVRELKTSISACLMYLP 194
           SC   LCC SP    W ++ LS    ++   S  +  +++  CS      SI  CL++ P
Sbjct: 99  SCAVGLCCNSPSSRMWKSLILSVTHLNLS--SLPVLTASSIACSY----ISIVLCLVFFP 152

Query: 195 YSG 203
           + G
Sbjct: 153 FQG 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,602,384
Number of Sequences: 237096
Number of extensions: 1315680
Number of successful extensions: 2465
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2465
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -