Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30198
(385 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 89 9e-19
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 2e-15
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 63 7e-11
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 40 0.001
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.56
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 30 0.56
SB_37539| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 28 3.0
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 28 3.0
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 27 4.0
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_52728| Best HMM Match : Herpes_UL3 (HMM E-Value=1.7) 27 5.2
SB_33603| Best HMM Match : PHD (HMM E-Value=0.00046) 27 5.2
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_7583| Best HMM Match : PT (HMM E-Value=6.1) 27 6.9
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 26 9.2
SB_13757| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_25200| Best HMM Match : RVT_1 (HMM E-Value=1.7) 26 9.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 89.4 bits (212), Expect = 9e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
K+K+KIS+ DK+ ILDKC +KWLD+NQ A+K+E+E+ QKELE +CNPIITK+YQ
Sbjct: 559 KVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQKELEKVCNPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 78.2 bits (184), Expect = 2e-15
Identities = 29/56 (51%), Positives = 45/56 (80%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
K+K+K+S+ +++ ++ +C T+ WL+ NQ A+KEE + QKELEG+CNPIITK+YQ
Sbjct: 651 KVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEIDAHQKELEGVCNPIITKLYQ 706
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 63.3 bits (147), Expect = 7e-11
Identities = 24/54 (44%), Positives = 40/54 (74%)
Frame = +2
Query: 5 LKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 166
L+ K+S SDK T+ +K + WL+ N LA+KEE+E ++KEL+ +C+PI+ K++
Sbjct: 559 LEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEKELQRVCSPIMAKVH 612
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNP 148
KL K+S+ DK+TI + I W+D NQ A E+++ ++++ + + +P
Sbjct: 1253 KLGGKLSEDDKKTITEAVEKAISWMDKNQDASVEDFKKEKRKWKMLYSP 1301
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 30.7 bits (66), Expect = 0.43
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 8 KEKISDSDKQTILDKCNTTIKW-LDSNQLADKEEYEHKQKELEGICNPIITKM 163
K K DK+ L + T+K+ LD +LA KE++ +KE EG + TKM
Sbjct: 108 KHKRDLRDKEQELSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMDTKM 159
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 30.3 bits (65), Expect = 0.56
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Frame = +2
Query: 8 KEKISDSDKQTILDKCNTTIKWLDSN------QLADK-EEYEHKQKELEGI 139
K + + D + +++C TIK LDSN Q+AD+ EE + ++ELE +
Sbjct: 183 KTRKAQDDCEKEVNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELESV 233
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 30.3 bits (65), Expect = 0.56
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 207 RAEHPEPEVPPPGLEAWPHHR 269
+A H +P VPPP +E PHHR
Sbjct: 263 KAHHSDPAVPPP-IEHRPHHR 282
>SB_37539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITK 160
KLK K D D + LDK T K SN E K L+GI P I+K
Sbjct: 126 KLKVKYFDGDGEVQLDKVWTLDKLPISNLSIPSSEDIRKCSHLQGIDFPEISK 178
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 44 LDKCNTTIKWLDSNQLADKEEYEHKQKELEG 136
+DK NTT LD + KE+ + K+K +G
Sbjct: 21 MDKSNTTCSMLDGKEQVMKEKKKEKRKHKKG 51
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 272 SSMVGPRLQPRGRHLRLRVLRPGSPAYLRGLLRHPGTSSLLSDCKCL-PILSACAHTPP 99
S+ +GP P R + P SP + LLR G++SL+ + L LS+ TPP
Sbjct: 66 SNALGPPPDPPSRPGGGKEEEPTSPPPMSNLLRELGSTSLMQRAQSLDESLSSKQGTPP 124
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 8 KEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQ 121
+EK ++T D+ N TI +L+ EE++HK+
Sbjct: 1693 REKWRKEYEKTTQDEINKTISYLEDQYTRGLEEFKHKE 1730
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 59 TTIKWLDSNQLADKEEYEHKQKELEGICNPIITK 160
T ++W D D EY+ + ++E N ++TK
Sbjct: 803 TGMQWKDKMSQKDSMEYKQTRSKIESAINNVVTK 836
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 233 HLRLRVLRPGSPAYLRGLLRHPGTSSLLSDCKCLPILSACAH 108
HL +RVL P P L LS C CLP+ +C H
Sbjct: 1140 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVH 1177
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 233 HLRLRVLRPGSPAYLRGLLRHPGTSSLLSDCKCLPILSACAH 108
HL +RVL P P L LS C CLP+ +C H
Sbjct: 1177 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVH 1214
>SB_52728| Best HMM Match : Herpes_UL3 (HMM E-Value=1.7)
Length = 398
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 8 KEKISDSDKQTILDKCNTTIKWLDSNQL-ADKEEYEHKQKELEGI 139
K +SD T +KC TT++ D +L A K E + EL +
Sbjct: 20 KRLVSDRGNLTCTEKCITTVELEDVRELAATKHRKEKRASELTDV 64
>SB_33603| Best HMM Match : PHD (HMM E-Value=0.00046)
Length = 396
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 346 QSRRGY-KVVVTGRFTCGVECWFNRPPRWWGHA 251
Q+++ + +V++G F CG W N PP H+
Sbjct: 356 QNKKSHPNIVISGDFNCGDIDWRNDPPSITNHS 388
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 346 QSRRGY-KVVVTGRFTCGVECWFNRPPRWWGHA 251
Q+++ + +V++G F CG W N PP H+
Sbjct: 356 QNKKSHPNIVISGDFNCGDIDWRNDPPSITNHS 388
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 5 LKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELE 133
+KE + +++++ KC T K LD+++ D+E+ E Q+E E
Sbjct: 1081 MKESLLNANREIGRLKCENTAKNLDADRKEDQED-EEVQREGE 1122
>SB_7583| Best HMM Match : PT (HMM E-Value=6.1)
Length = 501
Score = 26.6 bits (56), Expect = 6.9
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 46 RQVQHHHQVAGFQPTGRQGGV*AQAERIGRHLQSDNNEDVPGCRRS-PRRY 195
R VQH G +P GR+G +A +G H + G R S RRY
Sbjct: 76 RVVQHVGSPVGSEPQGREG---LRARAVGIHTPVPESNSAAGYRSSCYRRY 123
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 170 PGTSSLLSDCKCLPILSACAHTPPCRPVG 84
PGT + KC+ +L C P C P G
Sbjct: 2968 PGTYQCADNRKCISVLEVCDGIPSC-PAG 2995
>SB_13757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 346 QSRRGY-KVVVTGRFTCGVECWFNRPPRWWGH 254
Q+ + Y +V++G F CG W + PP H
Sbjct: 102 QNNKSYPNIVISGEFNCGDIDWQSDPPSPTNH 133
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 5 LKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYE 112
LKE+ + K+ I D+ T W+ + +K YE
Sbjct: 318 LKEQRKNRGKEEIFDRLIVTEMWIRQEYMPEKARYE 353
>SB_25200| Best HMM Match : RVT_1 (HMM E-Value=1.7)
Length = 371
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 174 PEESPEVCRA-SRAEHPEPEVPPPGLEAW 257
P +P CR S A P E P P LEAW
Sbjct: 280 PSLAPASCRPPSNATLPSRERPSPLLEAW 308
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,937,626
Number of Sequences: 59808
Number of extensions: 212583
Number of successful extensions: 764
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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