Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30198
(385 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 88 2e-18
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 79 1e-15
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 54 3e-08
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 53 8e-08
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 53 8e-08
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 49 1e-06
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 49 1e-06
AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical... 29 0.85
U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 26 7.9
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 26 7.9
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 26 7.9
AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormo... 26 7.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 88.2 bits (209), Expect = 2e-18
Identities = 37/56 (66%), Positives = 48/56 (85%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
KLK+KIS DK+ I DKC+ +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 558 KLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 78.6 bits (185), Expect = 1e-15
Identities = 33/56 (58%), Positives = 45/56 (80%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
KLK+KIS DK+ I DKC+ +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+YQ
Sbjct: 558 KLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 58.0 bits (134), Expect = 2e-09
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 14 KISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
K+S D + + T++WLDSN LA+K+E E K KEL+ +C I+TKM+Q
Sbjct: 560 KLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 58.0 bits (134), Expect = 2e-09
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 14 KISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
K+S D + + T++WLDSN LA+K+E E K KEL+ +C I+TKM+Q
Sbjct: 560 KLSTEDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 54.4 bits (125), Expect = 3e-08
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2
Query: 17 ISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
+S D + D T++W++ N LADK+E E K KEL+ IC I+TKM+Q
Sbjct: 561 LSAEDAKRAKDAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 52.8 bits (121), Expect = 8e-08
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 166
KL K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 214 KLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 52.8 bits (121), Expect = 8e-08
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 166
KL K++D DK +I I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 583 KLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 49.2 bits (112), Expect = 1e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
KL K+ + DK+TI + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 586 KLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 49.2 bits (112), Expect = 1e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMYQ 169
KL K+ + DK+TI + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 586 KLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>AC025726-20|AAK73908.1| 318|Caenorhabditis elegans Hypothetical
protein Y71G12B.10 protein.
Length = 318
Score = 29.5 bits (63), Expect = 0.85
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 2 KLKEKISDSDKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPII 154
+L +++S+ QT+ + KW+ QLAD E K + EG+ P++
Sbjct: 44 ELIDRLSECGFQTVETTSFVSPKWVP--QLADHNEIVKKHRRFEGVSYPVL 92
>U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical
protein F56D2.5 protein.
Length = 437
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 50 KCNTTIKWLDSNQLADKEEYEHKQKELEGICN 145
KCN + WL S L + + Y H + +G CN
Sbjct: 389 KCNASFCWLCSKTLNNVDPYSHYSE--KGSCN 418
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 56 NTTIKWLDSNQLADKEEYEHKQKELEGICNPIITKM 163
N I+ LD NQ + + Y ++ KE+E C I M
Sbjct: 290 NMLIEELDQNQQSIEASYNNRLKEMEERCRGRIAAM 325
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 5 LKEKISDSDK-QTILDKCNTTIKWLDSNQLADKEEYEHKQKEL 130
L +K+S++++ Q +D IKW+D + E+Y E+
Sbjct: 174 LHKKLSENERFQKFVDNAEDLIKWMDDKEKEICEKYSKMDFEV 216
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 29 DKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITK 160
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 29 DKQTILDKCNTTIKWLDSNQLADKEEYEHKQKELEGICNPIITK 160
D +L K I+ L LAD++E KQK ++ I TK
Sbjct: 1042 DSMEMLRKKEKEIRELQQKVLADRDELAEKQKAIDAQEEEIQTK 1085
>AF039037-7|AAC48231.3| 441|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 204 protein.
Length = 441
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 183 SPEVCRASRAEHPEPEVP---PPGLEAW 257
SPE ASR +P P P PP ++ W
Sbjct: 221 SPETIEASRKPNPNPGSPRILPPNVKKW 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,795,054
Number of Sequences: 27780
Number of extensions: 149021
Number of successful extensions: 659
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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