Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30196
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.87 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.87 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.1  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +3

Query: 471 NKRGRKHYLSLSVALGSYRALYLLNWVYRYVVESHYELIAIISGVVQTILYCDFFYL--- 641
           N R  K  +  ++ L      ++  W+Y  V+E+  +++ I       IL+ DF YL   
Sbjct: 35  NFRSSKLLILYNIILQVLFVSFVSYWLY-LVLEAD-DMLPIYKNTYLIILFADFAYLETT 92

Query: 642 YITKVLKGKKL 674
           +I  +LK  KL
Sbjct: 93  WICTLLKKDKL 103


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +3

Query: 471 NKRGRKHYLSLSVALGSYRALYLLNWVYRYVVESHYELIAIISGVVQTILYCDFFYL--- 641
           N R  K  +  ++ L      ++  W+Y  V+E+  +++ I       IL+ DF YL   
Sbjct: 53  NFRSSKLLILYNIILQVLFVSFVSYWLY-LVLEAD-DMLPIYKNTYLIILFADFAYLETT 110

Query: 642 YITKVLKGKKL 674
           +I  +LK  KL
Sbjct: 111 WICTLLKKDKL 121


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 564 QHNGKPSSRGTELYMNLKQ 508
           Q  G+P  RGT++ +++K+
Sbjct: 167 QDRGEPLGRGTKIVLHMKE 185


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 322 HGCDHRW 302
           +GC+HRW
Sbjct: 377 YGCEHRW 383


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 397 LEVLWTFSIYLESVAILPQL 456
           L  LW  +I+L S+ + P+L
Sbjct: 7   LVTLWKLTIFLSSMCLDPRL 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,402
Number of Sequences: 336
Number of extensions: 4314
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)