Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30196
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49887-4|CAA90056.2|  213|Caenorhabditis elegans Hypothetical pr...   133   1e-31
AF081125-1|AAC31954.1|  213|Caenorhabditis elegans ER lumen prot...   133   1e-31
U20861-10|AAA62292.1|  213|Caenorhabditis elegans Hypothetical p...   119   2e-27
AF036693-1|AAK29785.1|  391|Caenorhabditis elegans Hypothetical ...    35   0.073
Z81119-6|CAB03337.2|  401|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z49887-4|CAA90056.2|  213|Caenorhabditis elegans Hypothetical
           protein F09B9.3 protein.
          Length = 213

 Score =  133 bits (322), Expect = 1e-31
 Identities = 58/82 (70%), Positives = 74/82 (90%)
 Frame = +1

Query: 262 SYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEVLWTFSIYLESVA 441
           S+ T+YLM+ KFKATYD N+D+FRIEFL+IP+ ILALLINHEF  +EV+WTFSIYLE+VA
Sbjct: 71  SFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEFIFMEVMWTFSIYLEAVA 130

Query: 442 ILPQLFLVSKTREAESITSHYL 507
           I+PQLF++S+T  AE+IT+HYL
Sbjct: 131 IMPQLFMLSRTGNAETITAHYL 152



 Score = 85.4 bits (202), Expect = 4e-17
 Identities = 36/61 (59%), Positives = 49/61 (80%)
 Frame = +3

Query: 489 HYLSLSVALGSYRALYLLNWVYRYVVESHYELIAIISGVVQTILYCDFFYLYITKVLKGK 668
           HYL    ALGSYR LY+LNWVYRY  ES ++ I++++G+VQT+LY DFFYLYIT+V++  
Sbjct: 150 HYL---FALGSYRFLYILNWVYRYYTESFFDPISVVAGIVQTVLYADFFYLYITRVIQSN 206

Query: 669 K 671
           +
Sbjct: 207 R 207



 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 33/67 (49%), Positives = 41/67 (61%)
 Frame = +2

Query: 53  MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVSPYN 232
           MN+FR   D              WKSRSC GISG+SQ+LF++V+ TRYLDL T   S YN
Sbjct: 1   MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYN 60

Query: 233 TVMKLVF 253
           T MK+ +
Sbjct: 61  TAMKIFY 67


>AF081125-1|AAC31954.1|  213|Caenorhabditis elegans ER lumen protein
           retaining receptor protein.
          Length = 213

 Score =  133 bits (322), Expect = 1e-31
 Identities = 58/82 (70%), Positives = 74/82 (90%)
 Frame = +1

Query: 262 SYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEVLWTFSIYLESVA 441
           S+ T+YLM+ KFKATYD N+D+FRIEFL+IP+ ILALLINHEF  +EV+WTFSIYLE+VA
Sbjct: 71  SFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEFIFMEVMWTFSIYLEAVA 130

Query: 442 ILPQLFLVSKTREAESITSHYL 507
           I+PQLF++S+T  AE+IT+HYL
Sbjct: 131 IMPQLFMLSRTGNAETITAHYL 152



 Score = 85.4 bits (202), Expect = 4e-17
 Identities = 36/61 (59%), Positives = 49/61 (80%)
 Frame = +3

Query: 489 HYLSLSVALGSYRALYLLNWVYRYVVESHYELIAIISGVVQTILYCDFFYLYITKVLKGK 668
           HYL    ALGSYR LY+LNWVYRY  ES ++ I++++G+VQT+LY DFFYLYIT+V++  
Sbjct: 150 HYL---FALGSYRFLYILNWVYRYYTESFFDPISVVAGIVQTVLYADFFYLYITRVIQSN 206

Query: 669 K 671
           +
Sbjct: 207 R 207



 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 33/67 (49%), Positives = 41/67 (61%)
 Frame = +2

Query: 53  MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVSPYN 232
           MN+FR   D              WKSRSC GISG+SQ+LF++V+ TRYLDL T   S YN
Sbjct: 1   MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYN 60

Query: 233 TVMKLVF 253
           T MK+ +
Sbjct: 61  TAMKIFY 67


>U20861-10|AAA62292.1|  213|Caenorhabditis elegans Hypothetical
           protein C28H8.4 protein.
          Length = 213

 Score =  119 bits (287), Expect = 2e-27
 Identities = 53/82 (64%), Positives = 66/82 (80%)
 Frame = +1

Query: 262 SYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEVLWTFSIYLESVA 441
           +YAT+YLM+ KF++TY    DTFR+E L++P  ILALLINH+F   E+LWTFSIYLE+VA
Sbjct: 71  TYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLINHDFAPFELLWTFSIYLEAVA 130

Query: 442 ILPQLFLVSKTREAESITSHYL 507
           ILPQLFL+  T  AE IT+HYL
Sbjct: 131 ILPQLFLLQSTGSAEVITAHYL 152



 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 36/66 (54%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = +3

Query: 489 HYLSLSVALGSYRALYLLNWVYRYVVESHYELIAIISGVVQTILYCDFFYLYITKVLKGK 668
           HYL    ALGSYRALY+ NW+YRY  E +++ I +++G+VQT+LY DFFYLY+T+V++ +
Sbjct: 150 HYL---FALGSYRALYIFNWIYRYYTEDYFDPIVVVAGIVQTVLYADFFYLYVTRVVQTR 206

Query: 669 K-LQLP 683
           K ++LP
Sbjct: 207 KGMELP 212



 Score = 78.2 bits (184), Expect = 6e-15
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = +2

Query: 53  MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVSPYN 232
           MNIFR+  D              WKSRSC+GIS +SQILF++V+T RYLDL +T++S YN
Sbjct: 1   MNIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYN 60

Query: 233 TVMKLVF 253
           T MK+ F
Sbjct: 61  TTMKITF 67


>AF036693-1|AAK29785.1|  391|Caenorhabditis elegans Hypothetical
           protein C49A9.7 protein.
          Length = 391

 Score = 34.7 bits (76), Expect = 0.073
 Identities = 18/76 (23%), Positives = 41/76 (53%)
 Frame = +1

Query: 280 LMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEVLWTFSIYLESVAILPQLF 459
           L+   F++ YD  + T  + F+  PT  +  +++  F    +L+T +I+L  +     ++
Sbjct: 27  LINCTFQSFYDQMYQTHGVYFIFEPTPFVHPIVSQIF--YGILFTLTIFLALMGNFTVMW 84

Query: 460 LVSKTREAESITSHYL 507
           ++   R+  S+T++YL
Sbjct: 85  IILYHRQMRSVTNYYL 100


>Z81119-6|CAB03337.2|  401|Caenorhabditis elegans Hypothetical
           protein T10H4.8 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 413 LFPFIWNLSLFYLNCSWFQKQERPK-ALPLIICCFRF 520
           L   I  LS+F+   +W QK  +PK A+ +I+  F F
Sbjct: 136 LMALIRTLSVFFPMSNWIQKLSKPKNAIFMIVVVFTF 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,131
Number of Sequences: 27780
Number of extensions: 380350
Number of successful extensions: 867
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)