Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30193
         (307 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q554Q1 Cluster: Putative uncharacterized protein; n=1; ...    26   1.7  
UniRef50_O88163 Cluster: T-DNA oncoprotein; n=1; Agrobacterium t...    32   2.2  
UniRef50_Q2ADF9 Cluster: Putative uncharacterized protein precur...    31   6.7  
UniRef50_Q5CI48 Cluster: Cation exchanger; n=2; Cryptosporidium|...    31   6.7  
UniRef50_Q3UQ92 Cluster: 10 days lactation, adult female mammary...    26   8.2  

>UniRef50_Q554Q1 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 101

 Score = 25.8 bits (54), Expect(2) = 1.7
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 307 FFFFFFFFF 281
           FFFFFFFFF
Sbjct: 17  FFFFFFFFF 25



 Score = 25.8 bits (54), Expect(2) = 1.7
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 304 FFFFFFFFXXXKFSN 260
           FFFFFFFF   K +N
Sbjct: 47  FFFFFFFFYFNKENN 61


>UniRef50_O88163 Cluster: T-DNA oncoprotein; n=1; Agrobacterium
           tumefaciens|Rep: T-DNA oncoprotein - Agrobacterium
           tumefaciens
          Length = 242

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 49  TTLLWLPKPSDITI*AQPPILR*ELCLNRIVQLHSR 156
           T  LW P+  DI     PP  R E+C   I++LH+R
Sbjct: 107 TRTLWRPRRQDIVACTMPPF-RGEICKQEILRLHNR 141


>UniRef50_Q2ADF9 Cluster: Putative uncharacterized protein
           precursor; n=1; Halothermothrix orenii H 168|Rep:
           Putative uncharacterized protein precursor -
           Halothermothrix orenii H 168
          Length = 378

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 158 GRECSCTILFRQSSHLKIGGWAHIVMSE 75
           G + SC I+FR +S +KI G + +V+ E
Sbjct: 78  GEKASCEIVFRNNSFVKIDGGSEVVIGE 105


>UniRef50_Q5CI48 Cluster: Cation exchanger; n=2;
           Cryptosporidium|Rep: Cation exchanger - Cryptosporidium
           hominis
          Length = 940

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 68  QSPLTSQYEPSHLS*DESSV*IGSYNCIPVLKVLRRANMSFTANRLY 208
           +SP+ SQ   SHL  D+SS  IG+ N I +    +  N S T++  Y
Sbjct: 483 KSPVYSQLSASHLKGDQSSQ-IGNSNSISISDACQSNNFSATSSSSY 528


>UniRef50_Q3UQ92 Cluster: 10 days lactation, adult female mammary
           gland cDNA, RIKEN full-length enriched library,
           clone:D730036I04 product:hypothetical Phenylalanine-
           rich region profile containing protein, full insert
           sequence; n=1; Mus musculus|Rep: 10 days lactation,
           adult female mammary gland cDNA, RIKEN full-length
           enriched library, clone:D730036I04 product:hypothetical
           Phenylalanine- rich region profile containing protein,
           full insert sequence - Mus musculus (Mouse)
          Length = 135

 Score = 25.8 bits (54), Expect(2) = 8.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 304 FFFFFFFFXXXKFS 263
           FFFFFFFF    FS
Sbjct: 116 FFFFFFFFSVFDFS 129



 Score = 23.4 bits (48), Expect(2) = 8.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 307 FFFFFFFFF 281
           F FFFFFFF
Sbjct: 114 FLFFFFFFF 122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,854,832
Number of Sequences: 1657284
Number of extensions: 3632808
Number of successful extensions: 8125
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7127
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)