Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30193
         (307 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52446-1|CAA36685.1|  373|Homo sapiens protein ( Human mRNA for ...    27   8.1  
U51015-1|AAB09779.1|   46|Homo sapiens branched chain alpha-keto...    27   8.1  
U50708-1|AAB16763.1|  392|Homo sapiens branched chain alpha-keto...    27   8.1  
M55575-1|AAA51812.1|  392|Homo sapiens branched chain alpha-keto...    27   8.1  
D90391-1|BAA14389.1|  392|Homo sapiens E-1-beta subunit of branc...    27   8.1  
BT020063-1|AAV38866.1|  392|Homo sapiens branched chain keto aci...    27   8.1  
BC040139-1|AAH40139.1|  392|Homo sapiens branched chain keto aci...    27   8.1  
AL391595-1|CAI15049.1|  392|Homo sapiens branched chain keto aci...    27   8.1  
AL049696-1|CAC36881.2|  392|Homo sapiens branched chain keto aci...    27   8.1  

>X52446-1|CAA36685.1|  373|Homo sapiens protein ( Human mRNA for
           E1b-beta subunit of the branched-chain complex. ).
          Length = 373

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 330 CFLNLEAPISRVCGYDTPFPHIFEPFYI 357


>U51015-1|AAB09779.1|   46|Homo sapiens branched chain
           alpha-ketoacid dehydrogenase E1-beta subunit protein.
          Length = 46

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 3   CFLNLEAPISRVCGYDTPFPHIFEPFYI 30


>U50708-1|AAB16763.1|  392|Homo sapiens branched chain
           alpha-ketoacid dehydrogenase E1 beta subunit protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 349 CFLNLEAPISRVCGYDTPFPHIFEPFYI 376


>M55575-1|AAA51812.1|  392|Homo sapiens branched chain alpha-keto
           acid dehydrogenase E1-beta subunit protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 349 CFLNLEAPISRVCGYDTPFPHIFEPFYI 376


>D90391-1|BAA14389.1|  392|Homo sapiens E-1-beta subunit of branched
           chain alpha-keto acid dehydrogenase protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 349 CFLNLEAPISRVCGYDTPFPHIFEPFYI 376


>BT020063-1|AAV38866.1|  392|Homo sapiens branched chain keto acid
           dehydrogenase E1, beta polypeptide (maple syrup urine
           protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 349 CFLNLEAPISRVCGYDTPFPHIFEPFYI 376


>BC040139-1|AAH40139.1|  392|Homo sapiens branched chain keto acid
           dehydrogenase E1, beta polypeptide (maple syrup urine
           protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 349 CFLNLEAPISRVCGYDTPFPHIFEPFYI 376


>AL391595-1|CAI15049.1|  392|Homo sapiens branched chain keto acid
           dehydrogenase E1, beta polypeptide (maple syrup urine
           protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 349 CFLNLEAPISRVCGYDTPFPHIFEPFYI 376


>AL049696-1|CAC36881.2|  392|Homo sapiens branched chain keto acid
           dehydrogenase E1, beta polypeptide (maple syrup urine
           protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 29  CFFNAE*PLC--CGYQSPLTSQYEPSHL 106
           CF N E P+   CGY +P    +EP ++
Sbjct: 349 CFLNLEAPISRVCGYDTPFPHIFEPFYI 376


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,738,115
Number of Sequences: 237096
Number of extensions: 585183
Number of successful extensions: 772
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)