Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30192
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 81 1e-15
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 73 3e-13
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 41 0.001
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 40 0.002
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.006
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 38 0.011
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 36 0.044
05_06_0246 + 26656629-26656907,26657001-26657228,26657595-266576... 34 0.14
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 33 0.24
01_06_0445 - 29441472-29442152,29442244-29442357,29442959-294431... 33 0.31
03_01_0249 - 1935355-1935827,1936129-1936330 32 0.41
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.41
11_06_0584 - 25220371-25222917 31 1.3
02_05_1202 + 34932291-34933027,34933297-34933774 31 1.3
02_05_0565 + 30010395-30010485,30011604-30011678,30011913-300121... 30 2.2
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 3.9
02_04_0487 + 23353587-23354603 29 3.9
02_04_0484 + 23307119-23308135 29 3.9
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 5.1
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287... 29 5.1
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 29 5.1
01_05_0636 + 23852985-23853142,23853253-23853445,23853910-238540... 29 5.1
01_01_0735 + 5730783-5733320 29 5.1
12_02_0180 - 14977508-14977648,14978071-14978283 28 6.7
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 28 6.7
07_01_0689 - 5218920-5220107 28 8.9
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 8.9
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 28 8.9
01_06_0327 + 28506354-28506469,28506568-28507168,28507397-28507531 28 8.9
01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294 28 8.9
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 80.6 bits (190), Expect = 1e-15
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +3
Query: 21 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 200
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 201 VLLTESNAIAYYVANESLAEEIWLPK---PVSGS 293
V ESNAIA YV + S E+ K P+ GS
Sbjct: 625 VF--ESNAIARYVLSSSHFPEVTRSKSDNPLYGS 656
Score = 73.7 bits (173), Expect = 1e-13
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +3
Query: 21 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 200
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 201 VLLTESNAIAYYVANESLAEEIWLPK---PVSGS 293
V ESNAIA YV + E+ K P+ GS
Sbjct: 64 VF--ESNAIARYVLSHCHFPEVTRSKADNPLYGS 95
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +2
Query: 257 GGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGH 436
G L A + QW +S +E+ + W+FP LG + + E A + L +L L+ H
Sbjct: 655 GSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTH 714
Query: 437 LLTRTFLVTERITLADVIV 493
L + T+LV +TLAD+++
Sbjct: 715 LASNTYLVGHSVTLADIVM 733
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +2
Query: 257 GGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGH 436
G L A + QW +S +E+ W++P LGI + + E A + L +L L+ H
Sbjct: 94 GSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTH 153
Query: 437 LLTRTFLVTERITLADVIV 493
L + T+LV +TLAD+++
Sbjct: 154 LASNTYLVGHSVTLADIVM 172
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 418 KSTGRTSSHTHLPCYRENHTCRCHCLQYTAD---AFQHVLDPSVRSSLINVQRWFLTVAH 588
+S G ++H Y H+ + T + F ++ S S +V+R+F T+ +
Sbjct: 145 RSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVN 204
Query: 589 QPQVSAVVGSL 621
QP V+G +
Sbjct: 205 QPNFKKVLGDV 215
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 418 KSTGRTSSHTHLPCYRENHTCRCHCLQYTAD---AFQHVLDPSVRSSLINVQRWFLTVAH 588
+S G ++H Y H+ + T + F ++ + S +V+R+F T+ +
Sbjct: 706 RSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVN 765
Query: 589 QPQVSAVVGSL 621
QP V+G +
Sbjct: 766 QPNFKKVMGDV 776
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 3 PTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAF 182
P A VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+P
Sbjct: 22 PVGMALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVL 81
Query: 183 ESADGKVLLTESNAIAYYVA 242
E+ +G V ESNAIA YVA
Sbjct: 82 ETPEGAVF--ESNAIARYVA 99
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +2
Query: 257 GGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGH 436
G L + + QW +S +E+ W++P LG + E A + L +L L+ H
Sbjct: 109 GSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTH 168
Query: 437 LLTRTFLVTERITLADVIV 493
L + T+LV +TLAD+++
Sbjct: 169 LASNTYLVGHSVTLADIVM 187
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 406 TGRLKSTGRTSSHTHLPCYRENHTCRCHCLQYTAD---AFQHVLDPSVRSSLINVQRWFL 576
T +S G ++H Y H+ + T + F +L S S +V+R+F
Sbjct: 156 TSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFW 215
Query: 577 TVAHQPQVSAVVG 615
T+ +QP V+G
Sbjct: 216 TMVNQPNFKKVIG 228
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 63 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 239
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 57 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 233
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 234 YVANESLAEEI 266
Y+ + + ++
Sbjct: 74 YILRKYKSSKV 84
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 57 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 233
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 234 YVANESLAEE 263
Y+ + A +
Sbjct: 74 YILRKHRATD 83
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 9 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 188
MA +Y + + L+ + G + +V P + +K + + P G+VPAFE
Sbjct: 1 MAPAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE- 59
Query: 189 ADGKVLLTESNAIAYYV 239
DG + L ES AI+ Y+
Sbjct: 60 -DGDLTLFESRAISKYI 75
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +2
Query: 398 SDLLAALKVLDGHLLTRTFLVTERITLADVIVF 496
S+ AA LDG+L +RTFLV+ +++AD++V+
Sbjct: 93 SEFEAACSFLDGYLASRTFLVSYGLSIADIVVW 125
>05_06_0246 +
26656629-26656907,26657001-26657228,26657595-26657630,
26658362-26658475,26658562-26659167
Length = 420
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -1
Query: 336 AQEAGSSSLSDHDAHCQTRAWVARSPPRDFHWQRSKRWHCFQLGAPFHRHFRMQALFRQE 157
A +A S+ S+ DA A V R+PPRDF R + W ++ A F +AL
Sbjct: 44 AGDASESASSEADAFSSVVAAVVRAPPRDFRVIR-QEWAAVRVQAAFRAFLARRALKALR 102
Query: 156 TSSRSLRTCWSRQIRNSVLLSHQSRNIVRR 67
R R +R + ++ + N + R
Sbjct: 103 GIVRLQALVRGRLVRRQLAVTLKCMNALLR 132
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 398 SDLLAALKVLDGHLLTRTFLVTERITLADVIVF 496
S+ A +DG+L++RTFLV +T+AD+ V+
Sbjct: 91 SEFEVACSFVDGYLMSRTFLVGHVLTIADITVW 123
>01_06_0445 -
29441472-29442152,29442244-29442357,29442959-29443186,
29443284-29443586
Length = 441
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = -1
Query: 348 GKTQAQEAGSSSLSDHDAHCQTRAWVARSPPRDFHWQRSKRWHCFQLGAPFHRHFRMQAL 169
G A E S + S DA A V R+PPRDF R + W ++ F +AL
Sbjct: 48 GNASASEVYSETSSSADALSSVVAAVVRAPPRDFRLIR-QEWAAVRIQTAFRAFLARRAL 106
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 129 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE 248
+KS FLK P G+VPAF+ D + ES AI Y+ ++
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQ 79
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.41
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 24 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 200
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 201 VLLTESNAIAYYVANE 248
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 468 LSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 304
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 371 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVF 496
+++ + A +L AAL L+ HL +L + +TLADV +F
Sbjct: 252 SQEAYDAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLF 293
>02_05_0565 +
30010395-30010485,30011604-30011678,30011913-30012138,
30014432-30014649,30015170-30015303,30015424-30015675,
30016009-30016416
Length = 467
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 534 RV*HVLESISSVLKTMTSASVILSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNC 364
+V V ++I + ASV+L + +R S T + ASR+ A +TF L C
Sbjct: 223 KVWRVSQAIGDIAFAYPFASVLLEIEDTLRSPPPESETMRTASRASIAVTTFFYLCC 279
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 144 FLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLAEEIWLPKPVSGSG 296
FLK P GKVP F DGK + +S+ I + + + P + G
Sbjct: 49 FLKISPEGKVPVFNGGDGK-WIPDSDVITQVIEEKYPTPSLVTPPEYASVG 98
>02_04_0487 + 23353587-23354603
Length = 338
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 294 HCQTRAWVARSPPRDFHWQRSKRWHCFQLGAPFHRH 187
H T W R P D HW + + Q G P H H
Sbjct: 128 HADTVLWYCR--PGDNHWVKRHQHQYLQPGPPHHEH 161
>02_04_0484 + 23307119-23308135
Length = 338
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 294 HCQTRAWVARSPPRDFHWQRSKRWHCFQLGAPFHRH 187
H T W R P D HW + + Q G P H H
Sbjct: 128 HADTVLWYCR--PGDNHWVKRHQHQYLQPGPPHHEH 161
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 441 SHAPSLLPRESHLPMSLSS 497
+H PSL+P ESHL S+SS
Sbjct: 498 NHQPSLVPNESHLNNSVSS 516
>09_03_0041 +
11826788-11828002,11828101-11828563,11828668-11828798,
11829227-11829577,11829723-11829879,11829968-11830260,
11830367-11830426,11830530-11830619,11830774-11830857
Length = 947
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 516 PARARPERPFVADKRSAL-VPDRRXPAASVGRRRLAHASVRLPPTYDPKKYQELAGAQNK 692
P P+ PF + RS + RR AA+ A S P T P+K L A K
Sbjct: 9 PHALSPKPPFPSTLRSTRSLRLRRATAAAAAAG--AGVSSSSPSTSSPEKAPALDVASGK 66
Query: 693 KEGKKRLRSVK 725
+ GKKR RS+K
Sbjct: 67 RGGKKR-RSLK 76
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 504 SVLKTMTSASVILSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEA 325
S + M +A V + +K RVR PSST ++A+RS C + + + A+
Sbjct: 410 SAVDRMVNA-VKVEPKKKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVT 468
Query: 324 GSSSLS 307
SS LS
Sbjct: 469 ESSKLS 474
>01_05_0636 +
23852985-23853142,23853253-23853445,23853910-23854033,
23854285-23854637,23855525-23856530,23856892-23857085,
23857238-23857324
Length = 704
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 592 AGXRRSGTNAERLSATNGRSGLARAGKHQQCTEDNDIGKCDSLG 461
AG +G + +R ++ NG S L +HQQ +D + S G
Sbjct: 493 AGTTTNGADHQRENSVNGTSNLVANPEHQQGGSHSDTSRVTSTG 536
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 104 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 205
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>12_02_0180 - 14977508-14977648,14978071-14978283
Length = 117
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 603 GRRRLA-HASVRLPPTYDPKKYQELAGAQNKKEG 701
GRR+ A A RLPPT DP LA A + G
Sbjct: 35 GRRQAAPSAPSRLPPTADPATVAALAAAAGRSGG 68
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = -1
Query: 288 QTRAWVARSPPRDFHWQRSKRWHCFQLGAPFHRHFRMQALFRQETSSRSLRTCWSRQIRN 109
Q +W ++ + +W + +GAP ++ F Q + +Q+ + + QI
Sbjct: 468 QAMSWCRFKLSANYFLSKPYQWRKYIVGAPAYQGFHFQGMIKQQIDGVDMMLLYYHQI-- 525
Query: 108 SVLLSHQSRNIV 73
S++ S ++V
Sbjct: 526 SIVYCSVSEDVV 537
>07_01_0689 - 5218920-5220107
Length = 395
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +3
Query: 237 VANESLAEEIWLPKPVSG-----SGHHGLTANYCLLPALGSSLTLVSCNSTNRMLNVQSL 401
+A LA E W P + G H G N L ALG L V + R +N+ SL
Sbjct: 217 IAGFDLATEQWRPVLMDGPLPADQRHRGQRPNLSLA-ALGGRLVAVHHDYPGRTINLWSL 275
Query: 402 TYWPP*KYWTDIFS 443
T P WT + S
Sbjct: 276 T--PNTTTWTKLHS 287
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 390 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 271
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 27.9 bits (59), Expect = 8.9
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Frame = +2
Query: 224 HRLLRCQ*KSRGGDL----ATQARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNK 376
+R + + K+ G DL A+ A++ W PA VF P LG +
Sbjct: 76 NRYIATKYKAEGADLLPAEASPAKLEVWLEVESHHFYPAISGLVFQLLIKPLLGGAT-DT 134
Query: 377 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITLAD 484
V+ + L L V D HL +L R +LAD
Sbjct: 135 AAVDEHAAALAQVLDVYDAHLAGSRYLAGNRFSLAD 170
>01_06_0327 + 28506354-28506469,28506568-28507168,28507397-28507531
Length = 283
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 615 LAHASVRLPPTYDPKKYQELAGAQ 686
++H S LPPTYDP L G++
Sbjct: 21 VSHGSPSLPPTYDPSICSNLDGSK 44
>01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294
Length = 199
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 57 KALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKV--LLTESNAIA 230
+ L+ + G + ++ + KS L + P G+VPAF+ D + LL ESN
Sbjct: 17 RVLVCLEEVGAEYELVGIHIPAGEQKSPAHLARNPFGQVPAFQDGDLILFDLLKESN--- 73
Query: 231 YYVANESLAEEIWL 272
++ ++ ++WL
Sbjct: 74 --LSQSAIMVDVWL 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,498,596
Number of Sequences: 37544
Number of extensions: 487116
Number of successful extensions: 1522
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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