Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30191
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 1.3
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 24 1.3
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 24 1.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 6.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.0
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 276 NLIGLGSIFLMTLLAFPQPPII 211
+L G GSI+ MT++AF + +I
Sbjct: 133 SLFGCGSIWTMTMIAFDRYNVI 154
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 276 NLIGLGSIFLMTLLAFPQPPII 211
+L G GSI+ MT++AF + +I
Sbjct: 99 SLFGCGSIWTMTMIAFDRYNVI 120
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 276 NLIGLGSIFLMTLLAFPQPPII 211
+L G GSI+ MT++AF + +I
Sbjct: 9 SLFGCGSIWTMTMIAFDRYNVI 30
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 366 LASSGDNAAIPTNPKTTIFPSVK 298
+ASS N T TTI P VK
Sbjct: 949 VASSASNVTNVTTNLTTILPPVK 971
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 400 PEPFPVYY 423
P PFPVYY
Sbjct: 336 PVPFPVYY 343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,403
Number of Sequences: 438
Number of extensions: 4959
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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