Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30190
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 158 4e-39
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 158 4e-39
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 157 6e-39
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 156 2e-38
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 5e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 129 2e-30
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 86 3e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 86 3e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 85 5e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 77 1e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 73 2e-13
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 69 3e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 68 9e-12
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 58 7e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 42 6e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 41 0.001
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 39 0.005
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_10579| Best HMM Match : Extensin_2 (HMM E-Value=0.28) 31 0.91
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9) 30 2.1
SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13) 29 2.8
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.8
SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7) 29 2.8
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30524| Best HMM Match : TPR_2 (HMM E-Value=2.9e-36) 29 3.7
SB_30523| Best HMM Match : TPR_2 (HMM E-Value=9.9e-30) 29 3.7
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.9
SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05) 29 4.9
SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08) 28 6.4
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 8.5
SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 158 bits (384), Expect = 4e-39
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
ESCDCLQGFQL H
Sbjct: 125 ESCDCLQGFQLTH 137
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
Score = 97.5 bits (232), Expect = 9e-21
Identities = 49/62 (79%), Positives = 52/62 (83%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQTR 682
G LLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE + + CI
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE-NTDETYCIDNEA 206
Query: 683 LY 688
LY
Sbjct: 207 LY 208
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 652 NETYLHSTNEALYDICFR 705
+ETY NEALYDICFR
Sbjct: 197 DETYCID-NEALYDICFR 213
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 158 bits (384), Expect = 4e-39
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 435 ESCDCLQGFQLIH 473
ESCDCLQGFQL H
Sbjct: 338 ESCDCLQGFQLTH 350
Score = 142 bits (344), Expect = 2e-34
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 55 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 234
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 235 KYVPRAI 255
KYVPRA+
Sbjct: 271 KYVPRAV 277
Score = 97.5 bits (232), Expect = 9e-21
Identities = 49/62 (79%), Positives = 52/62 (83%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQTR 682
G LLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE + + CI
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE-NTDETYCIDNEA 419
Query: 683 LY 688
LY
Sbjct: 420 LY 421
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 652 NETYLHSTNEALYDICFR 705
+ETY NEALYDICFR
Sbjct: 410 DETYCID-NEALYDICFR 426
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 157 bits (382), Expect = 6e-39
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 435 ESCDCLQGFQLIH 473
ESCDC+QGFQL H
Sbjct: 70 ESCDCIQGFQLTH 82
Score = 93.5 bits (222), Expect = 2e-19
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = +2
Query: 509 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQTRLY 688
LLI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE + + CI LY
Sbjct: 95 LLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE-NTDETYCIDNEALY 153
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 652 NETYLHSTNEALYDICFR 705
+ETY NEALYDICFR
Sbjct: 142 DETYCID-NEALYDICFR 158
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 156 bits (378), Expect = 2e-38
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
ESCDC+QGFQL H
Sbjct: 125 ESCDCIQGFQLTH 137
Score = 134 bits (325), Expect = 5e-32
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PR++
Sbjct: 61 PRSV 64
Score = 97.1 bits (231), Expect = 1e-20
Identities = 48/62 (77%), Positives = 52/62 (83%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQTR 682
G LLISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVE + + CI
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVE-NTDETYCIDNEA 206
Query: 683 LY 688
LY
Sbjct: 207 LY 208
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 652 NETYLHSTNEALYDICFR 705
+ETY NEALYDICFR
Sbjct: 197 DETYCID-NEALYDICFR 213
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 338
LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 129 bits (311), Expect = 2e-30
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 435 ESCDCLQGFQLI 470
E+CDC+QG QLI
Sbjct: 81 ENCDCMQGVQLI 92
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKV 586
G L++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 128 QCTGLQGFLIFH 139
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 561 QCTGLQGFLIFH 572
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 232 GKYVPRAI 255
GK+VPRA+
Sbjct: 492 GKHVPRAV 499
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 41.1 bits (92), Expect = 9e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 149 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Score = 41.1 bits (92), Expect = 9e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 582 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 629
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 713 QCTGLQGFLIFH 724
Score = 85.0 bits (201), Expect = 5e-17
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 192 QCTGLQGFLIFH 203
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 646 HVPRAV 651
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 55 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEAS 228
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 229 GGKYVPRAI 255
GK+VPRA+
Sbjct: 122 AGKHVPRAV 130
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 241 VPRAI 255
VPRA+
Sbjct: 574 VPRAV 578
Score = 41.1 bits (92), Expect = 9e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 734 FSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 781
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 213 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 260
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 85.0 bits (201), Expect = 5e-17
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 127 QCTGLQGFLIFH 138
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 241 VPRAI 255
VPRA+
Sbjct: 61 VPRAV 65
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 509 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 151 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 195
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 83.8 bits (198), Expect = 1e-16
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK ++
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 441 CDCLQGFQLIH 473
C LQGF + H
Sbjct: 129 CTGLQGFLIFH 139
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 238 YVPRAISSTWSP 273
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
Score = 41.1 bits (92), Expect = 9e-04
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 149 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLE 196
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 441 CDCLQGFQLIH 473
C LQGF + H
Sbjct: 933 CTGLQGFLIFH 943
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK ++
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 499 GCTGLQGFLIFH 510
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 232 GKYVPRAISSTWSP 273
GK+VPRA+ + P
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 241 VPRAI 255
VPRA+
Sbjct: 433 VPRAV 437
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 509 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 956 LLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 1000
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 509 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
LL+ ++ +Y + +++ P+P +S VVEPYN+ L+ H +E
Sbjct: 523 LLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLE 567
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 83.4 bits (197), Expect = 2e-16
Identities = 33/72 (45%), Positives = 50/72 (69%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK ++
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 546 QCSGLQGFLVFH 557
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 441 CDCLQGFQLIH 473
C LQGF + H
Sbjct: 114 CTGLQGFLIFH 124
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 232 GKYVPRAISSTWSPA 276
GK+VPRA+ P+
Sbjct: 477 GKHVPRAVFVDLEPS 491
Score = 41.1 bits (92), Expect = 9e-04
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 567 FSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLE 614
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 134 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAISSTWSP 273
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 128 QCTGLQGFLIFH 139
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 149 FASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 196
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 81.4 bits (192), Expect = 7e-16
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK +
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMT 1037
Query: 435 ESCDCLQGFQLIH 473
+ C LQGF + H
Sbjct: 1038 DQCSGLQGFLIFH 1050
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ L+ + +Y + ++V P+P +S VVEPYN+ L+ H +E
Sbjct: 1060 FASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLE 1107
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 80.2 bits (189), Expect = 2e-15
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 438 SCDCLQGFQLIH 473
C LQGF + H
Sbjct: 93 QCTGLQGFLIFH 104
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + ++V P+P++S VVEPYN+ LS H +E
Sbjct: 114 FSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLE 161
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQTR 682
G LL+SKIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ CI
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDV-ADAAICIDNEA 114
Query: 683 LY 688
LY
Sbjct: 115 LY 116
Score = 68.9 bits (161), Expect = 4e-12
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = +3
Query: 342 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLIH 473
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +3
Query: 282 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 461
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 462 QLIH 473
+ H
Sbjct: 73 LIFH 76
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 86 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 133
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 73.3 bits (172), Expect = 2e-13
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 467
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 468 IH 473
H
Sbjct: 63 FH 64
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 74 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 121
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G L++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLE 75
Score = 34.3 bits (75), Expect = 0.098
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 420 VRKESESCDCLQGFQLIH 473
+RKE+E CD +QGFQL+H
Sbjct: 1 MRKEAEDCDAIQGFQLLH 18
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 67.7 bits (158), Expect = 9e-12
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 467
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 468 IH 473
H
Sbjct: 63 FH 64
Score = 41.1 bits (92), Expect = 9e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + ++V P+P++S VVEPYN+ L+ H +E
Sbjct: 74 FSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 121
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 238 YVPRAISSTWSPA 276
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 321 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLIH 473
P+ + G+ A NN+A+GHYT G + VD VLD +RK ++ C LQGF + H
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFH 129
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAISSTWSPAPWTLSARDL 303
+VPRA+ P LS L
Sbjct: 61 HVPRAVFVDLEPTVVALSPEQL 82
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + ++V P+P ++ VVEPYN+ L+ H +E
Sbjct: 139 FSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLE 186
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 321 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 461
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 73 IVHLQAGQCGNQIGAKFWEIISDE 144
IV LQ GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 52 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 219
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 220 EASGGKY 240
E + GK+
Sbjct: 250 ETASGKH 256
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y R ++V P+P++S VVEPYN+ L+ H +E
Sbjct: 280 FSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 327
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 121 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 222
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +3
Query: 258 VDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLD 416
VD E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 44 VDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMD 102
Query: 417 VVRKESESCDCLQGFQLIH 473
+RKE E CD G ++H
Sbjct: 103 AMRKEVERCDSFAGTIVMH 121
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +2
Query: 500 YGHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 24 FSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 71
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G +++ + ++YPD T +V PS D + PYN+ L++HQL E
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTE 207
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 231 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 365
+ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 524 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
+ ++YPD T +V PS D + PYN+ L++HQL E
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTE 59
>SB_10579| Best HMM Match : Extensin_2 (HMM E-Value=0.28)
Length = 815
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 196 ERINVYYNEASGGKYVPRAISSTWSPAPWTLSARDLSDRSSVRTTSFSDSPAPATTGPRD 375
E +N + SG + P +S+ P+P L+ +++ +D + T PR
Sbjct: 581 EMLNESLPDQSGLFFEPTGLSNEERPSPIVLTMGRNGPQTNAVAVKKNDPKSSPPTSPRS 640
Query: 376 TTQRVLSSLTRSS 414
TQ LS T +S
Sbjct: 641 ITQTTLSQTTSNS 653
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = -2
Query: 414 RGPSQRA-QHPLCSVPWPSCC---RRRTVRKRSCPDGR-SVRKVPSGQSPWCRAPSRRDG 250
R PS+R L S PS C RR + R P GR R++PSG P R PSRR
Sbjct: 162 RLPSRRLPSRRLPSRRLPSGCLPSRRGQLPSRRLPSGRLPSRRLPSGWLPSRRLPSRRLP 221
Query: 249 AGHV 238
+G +
Sbjct: 222 SGRL 225
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 348 RTVRKRSCPDGR-SVRKVPSGQSPWCRAPSRR 256
R + R P GR R++PSG+ P R PSRR
Sbjct: 11 RRLPSRRLPSGRLPSRRLPSGRLPSGRLPSRR 42
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 348 RTVRKRSCPDGR-SVRKVPSGQSPWCRAPSRR 256
R + R P GR R++PSG+ P R PSRR
Sbjct: 41 RRLPSRRLPSGRLPSRRLPSGRLPSGRLPSRR 72
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 482 WRHRVRYGHLLISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNATLSVHQLVEKHRT 655
W R + +SKI EY + + + + V+P PK+ D + +P+ L V QL+E++ T
Sbjct: 13 WVCAFRSHVICVSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLEQNLT 72
>SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 755
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +1
Query: 301 LSDRSSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRS--SM*SAKNQNLAI-AYRASNLY 471
+S+ S+ TTS + A T P DTTQ SS S S+ +A + A +++
Sbjct: 327 ISNASTTSTTSATTIAATGATTPTDTTQATPSSFVTSDASINTATTATIETEAIVSTSAL 386
Query: 472 IPSVAAPGPVWAPPHLKDP*RVPRQNHEHILSSPLAQ 582
P P P K+ R+ + + PL +
Sbjct: 387 SAFTETPSPEQRPTTSKEEPRISSSTERIVQTEPLVE 423
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 244 PRAISSTWSPAPWTLSARDLSDRS----SVRTTSFSDSPAPATTGPRDTTQRVLSSLTRS 411
PR S+T + AP T + R S + S TTS S + AP+T+ PR + L + T S
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRTGSTITLRTSTTS 146
Query: 412 SM 417
M
Sbjct: 147 VM 148
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +1
Query: 244 PRAISSTWSPAPWTLSARDLSDRS----SVRTTSFSDSPAPATTGPRDTTQRVLSSLTRS 411
PRA S+T + AP T + R S + S TTS S + AP+T+ PR + S+ + S
Sbjct: 26 PRAGSTTNTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRAGSTTTTSAPSTS 85
Query: 412 S 414
+
Sbjct: 86 T 86
>SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9)
Length = 907
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 536 YPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQTRLYTTSAS 703
+P TYS+ +++ YN T + H L +H T + TR TT+ S
Sbjct: 246 HPHHTRGTYSIQHDIQITPVEDTKYNTTSTSHPLYIQHDIHITPVEGTRYNTTTTS 301
>SB_13209| Best HMM Match : LRR_1 (HMM E-Value=1.7e-13)
Length = 489
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 118 KFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAISSTWSPAPWTLSAR 297
K ++ I ++ G+ P + + + +IN Y A G K V + ST S + +S
Sbjct: 86 KDYKKICNDLGVIPVSRFGKEIGAEEVKINHRYLRALGTKAVASILRSTDSTSKVQMSFN 145
Query: 298 DLSDRSSV 321
DLS + SV
Sbjct: 146 DLSAKGSV 153
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7)
Length = 177
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 184 DLQLERINVYYNEASGGKYVPRAISSTWSP-APWTLSARDLSDRSSVRTTS 333
DLQ RI Y + S VPR IS T + T++A L+ SS TT+
Sbjct: 62 DLQRGRICEYKKDCSQAGRVPRCISPTTATLTTETIAASQLTPSSSATTTT 112
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 515 ISKIREEYPDRIMNTYSVVPSPKVS 589
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_30524| Best HMM Match : TPR_2 (HMM E-Value=2.9e-36)
Length = 451
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 515 ISKIREEYPDRIMN---TYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQ 676
+ + +Y D I+N S+ + Y A +S+H+++ K+ K CIRQ
Sbjct: 159 VQSFQGKYEDAIINYQHALSLFQKAGDQEGQFNTYRAMVSIHEVICKYEEKKKCIRQ 215
>SB_30523| Best HMM Match : TPR_2 (HMM E-Value=9.9e-30)
Length = 908
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 515 ISKIREEYPDRIMN---TYSVVPSPKVSDTVVEPYNATLSVHQLVEKHRTKPTCIRQ 676
+ + +Y D I+N S+ + Y A +S+H+++ K+ K CIRQ
Sbjct: 124 VQSFQGKYEDAIINYQHALSLFQKAGDQEGQFNTYRAMVSIHEVICKYEEKKKCIRQ 180
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 352 APDCPKTKLSGRKICPKGPERTESMVPGSKST 257
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05)
Length = 670
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 298 DLSDRSSVRTTSFSDSPAPATTGPRDTTQRVLS 396
D SD ++ ++ SFS +P P +T P DT +L+
Sbjct: 311 DSSDLANRQSNSFSCNPDPFSTAPLDTGTTILN 343
>SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08)
Length = 993
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 298 DLSDRSSVRTTSFSDSPAPATTGPRDTTQRVLS 396
D SD ++ ++ SFS +P P +T P DT +L+
Sbjct: 423 DSSDLANRQSKSFSCNPDPFSTAPLDTGTTILN 455
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 520 KDP*RVPRQNHEHILSSPLAQSIR 591
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 27.9 bits (59), Expect = 8.5
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGA---YHGDSDLQ-----LERINVYYNE 222
R+IV L AG NQ+G + +I +E IDP Y GD ++ L++ +YN+
Sbjct: 647 RQIV-LPAGSM-NQLGIEVEDISENEEDIDPGKEDIDYDGDDEVNRALDGLQKSTFHYNK 704
Query: 223 ASGGKYVPRAISSTWSP--APWTLSARDLSDRSSVRTTSFSDSPAPATTGPRDTTQRVLS 396
S +AISS P +A+DL D + TG + T +
Sbjct: 705 TSD----KQAISSLKDPNLISSITAAKDLMDNVITSEDGITAKSVILETGNMEGTSNIEE 760
Query: 397 SLTRSS 414
R++
Sbjct: 761 CTERTN 766
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 532 RVPRQNHEHILSSPLAQSIR 591
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 184 DLQLERINVYYNEASGGKYVPRAISSTWSP-APWTLSARDLSDRSSVRTTS 333
DLQ RI Y + S VPR I T + T++A L+ SS TT+
Sbjct: 464 DLQRGRICEYKKDCSQAGRVPRCIGPTTATLTTETIAASQLTPSSSATTTT 514
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 532 RVPRQNHEHILSSPLAQSIR 591
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 532 RVPRQNHEHILSSPLAQSIR 591
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 219 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPELSSN 109
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,780,223
Number of Sequences: 59808
Number of extensions: 517729
Number of successful extensions: 1954
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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