Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30190
(706 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 153 1e-37
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 153 1e-37
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 153 1e-37
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 153 1e-37
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 151 3e-37
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 151 6e-37
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 150 1e-36
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 150 1e-36
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 149 2e-36
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 81 9e-16
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 81 9e-16
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 80 2e-15
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 80 2e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 80 2e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 80 2e-15
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 78 7e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 60 1e-09
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 60 1e-09
At4g37190.1 68417.m05265 expressed protein 34 0.11
At5g26650.1 68418.m03175 MADS-box protein (AGL36) contains inter... 32 0.32
At5g13210.1 68418.m01516 expressed protein 30 1.7
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.3
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 29 3.0
At5g23395.1 68418.m02738 expressed protein 29 4.0
At3g51080.1 68416.m05593 zinc finger (GATA type) family protein ... 29 4.0
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 4.0
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 28 5.2
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 28 5.2
At1g20650.1 68414.m02587 protein kinase family protein contains ... 28 5.2
At3g62910.1 68416.m07067 peptide chain release factor, putative ... 28 6.9
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 28 6.9
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 27 9.2
At4g31440.1 68417.m04468 hypothetical protein 27 9.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 9.2
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 153 bits (371), Expect = 1e-37
Identities = 66/73 (90%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 115 bits (277), Expect = 3e-26
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 153 bits (371), Expect = 1e-37
Identities = 66/73 (90%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 118 bits (284), Expect = 4e-27
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 153 bits (371), Expect = 1e-37
Identities = 66/73 (90%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 116 bits (278), Expect = 2e-26
Identities = 49/70 (70%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 153 bits (370), Expect = 1e-37
Identities = 65/73 (89%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 66 LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 126 ENCDCLQGFQVCH 138
Score = 120 bits (289), Expect = 9e-28
Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 240
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 241 VPRAISSTWSP 273
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE 195
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 151 bits (367), Expect = 3e-37
Identities = 64/73 (87%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 66 LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 125
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 126 ENCDCLQGFQVCH 138
Score = 124 bits (300), Expect = 4e-29
Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 240
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 241 VPRAISSTWSP 273
VPRA+ P
Sbjct: 61 VPRAVLMDLEP 71
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE 195
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 151 bits (365), Expect = 6e-37
Identities = 64/73 (87%), Positives = 72/73 (98%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 122 bits (294), Expect = 2e-28
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 244 PRAISSTWSP 273
PRAI P
Sbjct: 61 PRAILMDLEP 70
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (363), Expect = 1e-36
Identities = 64/73 (87%), Positives = 71/73 (97%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 121 bits (291), Expect = 5e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (363), Expect = 1e-36
Identities = 64/73 (87%), Positives = 71/73 (97%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
E+CDCLQGFQ+ H
Sbjct: 125 ENCDCLQGFQVCH 137
Score = 121 bits (291), Expect = 5e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (361), Expect = 2e-36
Identities = 65/73 (89%), Positives = 71/73 (97%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLIH 473
E+ DCLQGFQ+ H
Sbjct: 125 ENSDCLQGFQVCH 137
Score = 120 bits (290), Expect = 7e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 244 PRAISSTWSP 273
PRA+ P
Sbjct: 61 PRAVLMDLEP 70
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVE 194
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 80.6 bits (190), Expect = 9e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 438 SCDCLQGF 461
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLE 196
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 80.6 bits (190), Expect = 9e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 438 SCDCLQGF 461
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLE 196
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGF 461
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGF 461
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGF 461
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 438 SCDCLQGF 461
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLE 196
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.8 bits (183), Expect = 7e-15
Identities = 32/68 (47%), Positives = 49/68 (72%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK ++
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 438 SCDCLQGF 461
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 237
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 643
G LL+ ++ ++ + +++ PSP+VS VVEPYN+ LS H L+E
Sbjct: 150 GSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLE 196
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 428
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 429 ESESCDCLQGFQLIH 473
E++ D L+GF L H
Sbjct: 125 EADGSDSLEGFVLCH 139
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 246
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 RAI 255
RA+
Sbjct: 63 RAL 65
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQL 637
G L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRL 195
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 246
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 RAI 255
RA+
Sbjct: 63 RAL 65
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRK 428
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +
Sbjct: 66 LIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDR 124
Query: 429 ESESCDCLQGFQLIH 473
E++ D L+GF L H
Sbjct: 125 EADGSDSLEGFVLCH 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 503 GHLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQL 637
G L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRL 195
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 231
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 232 GKYVPRAISSTWSPAPWTLSARD--LSDRSSVRTTS 333
Y PR +S A T+S+R ++ SS R+ S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSSRGTLYNEGSSSRSDS 96
>At5g26650.1 68418.m03175 MADS-box protein (AGL36) contains interpro
domain: IPR002100 transcriptor factor, MADS box;
contains Pfam profile PF00319: SRF-type transcription
factor (DNA-binding and dimerisation domain)
Length = 327
Score = 32.3 bits (70), Expect = 0.32
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Frame = +1
Query: 169 YHGDS-DLQ-LER-INVYYNEASGG----KYVPRAISSTWSPAPWTLSARDLSDRSSVRT 327
YH D+ DLQ L+ IN+Y ++ +G K ++ S+ SP P + ++ D S
Sbjct: 128 YHYDAKDLQDLQSCINLYLDQLNGRIESIKENGESLLSSVSPFPTRIGVDEIGDES---- 183
Query: 328 TSFSDSPAPATTGPRDT 378
FSDSP ATTG DT
Sbjct: 184 --FSDSPIHATTGVVDT 198
>At5g13210.1 68418.m01516 expressed protein
Length = 673
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +1
Query: 487 APGPVWAPPHLKDP*R-VPRQNHEHILSSPLAQS-IRHCRRTIQCDSLSSPAS*KTQNE- 657
+P P+ PP L+DP +P+ S P + + + + + ++++SP T+N+
Sbjct: 2 SPSPLLGPPELRDPNSLLPKPTTTSGPSDPFMDAMVSNFNNSARVNNVNSPPMGYTENKS 61
Query: 658 -TYLHSTNEAL 687
TYL S N L
Sbjct: 62 ATYLSSGNPCL 72
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 396 LVDSVLDVVRKESESCDCLQGF 461
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 372 PWPSCCRRRTVRKRSCPDGRSVRKVPSGQSPWCRAPSRRDGAG 244
PW C + +RK+SCP+ +S +P G+ P P + G
Sbjct: 434 PWE--CAKFFLRKQSCPNFKSFFYLPCGKDPHRIKPDQEGSDG 474
>At5g23395.1 68418.m02738 expressed protein
Length = 162
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 304 SDRSSVRTTSFSDSPAPATTGPRDT 378
SD +S+ TT+ +++P P+ PRD+
Sbjct: 6 SDENSIPTTTTTNTPPPSANSPRDS 30
>At3g51080.1 68416.m05593 zinc finger (GATA type) family protein
GATA transcription factor 3 - Arabidopsis thaliana,
PIR:T05288
Length = 312
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 280 WTLSARDLSDRSSVRTTSFSDSPAPAT 360
W+ ++ L+D SS TTS S SP P++
Sbjct: 156 WSHGSQSLTDSSSSSTTSSSSSPRPSS 182
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 63 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 149
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +1
Query: 112 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAISSTWSPAPWTLS 291
G + W I+ + TG Y DL ER+++ +++A +Y P T +S
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVITNRGHDIMVS 104
Query: 292 ARDLSDRSSVRTTSFS 339
+ + + ++R T F+
Sbjct: 105 WKGDAGKMTIRKTDFN 120
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 250 AISSTWSPAPWTLSARDLSDRSSVRTTSFSDSPAPATTGPRD 375
A S T + AP T R LS + SP PA+TGP++
Sbjct: 516 ATSVTETAAPATSKMRPLSPYAIYADLKPPTSPTPASTGPKE 557
>At1g20650.1 68414.m02587 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 585
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 458 LPTYTFPRWRHRVRYGHLLISKIREEYPDRIMN 556
L T++ P + + ++GHL+ +R +YP R +N
Sbjct: 496 LVTWSRPYLKDQKKFGHLVDPSLRGKYPRRCLN 528
>At3g62910.1 68416.m07067 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 422
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -2
Query: 420 LHRGP----SQRAQHPLCSVPWPSCCRRRTVRKRSCPDGRSVRKVPSGQSPW 277
LH P S+++ +C V WP RRT R + +RK+ S + W
Sbjct: 17 LHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTW 68
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 267 PSRRDGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSNLVTTL 94
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S + V TL
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 247 RAISSTWSPAPWTLSARDLSDRSSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRSSM 417
R ISS SP+ T S R + RSS R +F TT ++ S L +S +
Sbjct: 32 RGISSLSSPSKSTCSDRFIPCRSSSRLHAFDLQDKEPTTPVKEGGNEAYSRLLKSEL 88
>At4g31440.1 68417.m04468 hypothetical protein
Length = 379
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 366 PSCCRRRTVRKRSCPDGRSVRKV-PSGQSPWCRAPSRRDGA 247
P C RT+R + CP G + + + P S R P RD A
Sbjct: 128 PGTCDDRTIRDKPCPLGSNGKVLGPFAYSRPGRYPDERDSA 168
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 70 EIVHLQAGQCGNQIGAKFWEIISD 141
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,611,796
Number of Sequences: 28952
Number of extensions: 349863
Number of successful extensions: 1229
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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