Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30189
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.50 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   4.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 105  TRGWETTTVHRPRSPSKPRTTS*CCTPKYT 194
            T  W TTT  R  + ++P TTS    P  T
Sbjct: 1048 TSPWWTTTTTRRTTTTRPTTTSTTTRPTTT 1077


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 360 LYCISHKFNAKLLFFSRTFLV 298
           + C+++KF+A ++    +FLV
Sbjct: 471 MICVAYKFDAAMMALRTSFLV 491


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 122 HDGTPATVAEQTQDNKLVLHPQIYETIRGGSSAAKYSALLT 244
           H  T + +AE+ ++ K ++ P+  E   G    A    LLT
Sbjct: 249 HRFTKSVIAERQENFKEIVVPETDEVYTGKRRLAMLDLLLT 289


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 122 HDGTPATVAEQTQDNKLVLHPQIYETIRGGSSAAKYSALLT 244
           H  T + +AE+ ++ K ++ P+  E   G    A    LLT
Sbjct: 249 HRFTKSVIAERQENFKEIVVPETDEVYTGKRRLAMLDLLLT 289


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 325 IIFQ*NVFS*NTKIFILESLWL 260
           +I + NV   N+ +FI +++WL
Sbjct: 137 MIIKKNVTQQNSDVFIFDNVWL 158


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 357 YCISHKFNAKLLF 319
           YC+S  FN  LLF
Sbjct: 60  YCVSITFNVHLLF 72


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 354 CISHKFNAKLLFFSRTFLVKTPKYL 280
           C S  FN  +  FS+    + P Y+
Sbjct: 114 CSSESFNEDIAVFSKQIRQEKPYYI 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,553
Number of Sequences: 336
Number of extensions: 1797
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)