Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30189
(410 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.14
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.14
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 1.0
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.1
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 3.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.2
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 20 9.5
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 20 9.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 20 9.5
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 26.2 bits (55), Expect = 0.14
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = -3
Query: 387 KLNFS*LSNLYCISHKFNAKLLFFSRTFLVKTPKYLF*NLCGYNEQSSVKSALYLAALLP 208
K N +S L+ S +NA L+ S + VKT K +NE + +Y ++
Sbjct: 666 KCNIQDMSFLF--SQLYNALLILISTVYAVKTRKIPE----NFNESKFIGFTMYTTCIIW 719
Query: 207 PRIVSYIWGCST---SLLSWVC-----SATVAGVPSWSPSLWFAIFK 91
V +G + ++ +C SATV V +SP ++ +F+
Sbjct: 720 LAFVPIYFGTGNAHETQITTLCVAISLSATVTLVCLYSPKIYIILFQ 766
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 26.2 bits (55), Expect = 0.14
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = -3
Query: 387 KLNFS*LSNLYCISHKFNAKLLFFSRTFLVKTPKYLF*NLCGYNEQSSVKSALYLAALLP 208
K N +S L+ S +NA L+ S + VKT K +NE + +Y ++
Sbjct: 756 KCNIQDMSFLF--SQLYNALLILISTVYAVKTRKIPE----NFNESKFIGFTMYTTCIIW 809
Query: 207 PRIVSYIWGCST---SLLSWVC-----SATVAGVPSWSPSLWFAIFK 91
V +G + ++ +C SATV V +SP ++ +F+
Sbjct: 810 LAFVPIYFGTGNAHETQITTLCVAISLSATVTLVCLYSPKIYIILFQ 856
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.4 bits (48), Expect = 1.0
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -1
Query: 194 RIFGGAALACCPGFARRPW-PVYR 126
R F ACCPG RR + P +R
Sbjct: 399 RAFVRILCACCPGRVRRRYQPAFR 422
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 3.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 165 LSWVCSATVAGVPSWSPSLWFAI 97
L VCSA V W P W I
Sbjct: 544 LVMVCSAPVWRFQPWGPFTWGGI 566
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 3.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 180 TPKYTKRYAAAVALL 224
T KY+KRY AVA +
Sbjct: 319 TYKYSKRYKMAVAFM 333
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.6 bits (41), Expect = 7.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 70 VLSFPRFAISIIDLNERSQ 14
VLSF + IID++E++Q
Sbjct: 50 VLSFGLTLMQIIDVDEKNQ 68
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 7.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3
Query: 153 CSATVAGVPSWSPSL 109
CS T GVPS SP+L
Sbjct: 589 CSTT-GGVPSKSPTL 602
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 20.2 bits (40), Expect = 9.5
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = -3
Query: 162 SWVCSATVAGVPSWSP 115
+W+ +G+P+W P
Sbjct: 329 NWMTYMPPSGIPNWVP 344
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.2 bits (40), Expect = 9.5
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 32 VDYANGESREAEDVLNLLKNLKIANQRLGDHDGTPATVAEQ 154
+ Y N + D +N+L L+ Q+L + T + +A Q
Sbjct: 257 IKYRNDNNIVRPDFINMLMELQKNPQKLENIKLTDSLIAAQ 297
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 20.2 bits (40), Expect = 9.5
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = -3
Query: 162 SWVCSATVAGVPSWSP 115
+W+ +G+P+W P
Sbjct: 329 NWMTYMPPSGIPNWVP 344
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,462
Number of Sequences: 438
Number of extensions: 1964
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -