Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30187
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   131   6e-31
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   131   6e-31
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   131   6e-31
BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p pro...    32   0.52 

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  131 bits (317), Expect = 6e-31
 Identities = 60/84 (71%), Positives = 69/84 (82%)
 Frame = +1

Query: 256 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHN 435
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH+
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHD 147

Query: 436 STIRFPLPKRVHHYKRLNTFAYKR 507
           S I+FPL +RVHH      F++++
Sbjct: 148 SKIKFPLVQRVHHKGNRKLFSFRK 171



 Score =  131 bits (316), Expect = 8e-31
 Identities = 61/84 (72%), Positives = 66/84 (78%)
 Frame = +2

Query: 2   AKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 181
           AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV
Sbjct: 3   AKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIV 62

Query: 182 XXXXXXXXXXXXXXNFGIWLRYES 253
                         NFGIWLRY+S
Sbjct: 63  SIKQVYETSPVKIKNFGIWLRYDS 86


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  131 bits (317), Expect = 6e-31
 Identities = 60/84 (71%), Positives = 69/84 (82%)
 Frame = +1

Query: 256 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHN 435
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH+
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHD 147

Query: 436 STIRFPLPKRVHHYKRLNTFAYKR 507
           S I+FPL +RVHH      F++++
Sbjct: 148 SKIKFPLVQRVHHKGNRKLFSFRK 171



 Score =  131 bits (316), Expect = 8e-31
 Identities = 61/84 (72%), Positives = 66/84 (78%)
 Frame = +2

Query: 2   AKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 181
           AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV
Sbjct: 3   AKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIV 62

Query: 182 XXXXXXXXXXXXXXNFGIWLRYES 253
                         NFGIWLRY+S
Sbjct: 63  SIKQVYETSPVKIKNFGIWLRYDS 86


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  131 bits (317), Expect = 6e-31
 Identities = 60/84 (71%), Positives = 69/84 (82%)
 Frame = +1

Query: 256 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHN 435
           SG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA  RR  VKQFH+
Sbjct: 88  SGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHD 147

Query: 436 STIRFPLPKRVHHYKRLNTFAYKR 507
           S I+FPL +RVHH      F++++
Sbjct: 148 SKIKFPLVQRVHHKGNRKLFSFRK 171



 Score =  131 bits (316), Expect = 8e-31
 Identities = 61/84 (72%), Positives = 66/84 (78%)
 Frame = +2

Query: 2   AKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 181
           AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGEIV
Sbjct: 3   AKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIV 62

Query: 182 XXXXXXXXXXXXXXNFGIWLRYES 253
                         NFGIWLRY+S
Sbjct: 63  SIKQVYETSPVKIKNFGIWLRYDS 86


>BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p
          protein.
          Length = 328

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 2  AKGQLREYEVIGRKLP 49
          AKG L+EYEV+GRKLP
Sbjct: 3  AKGLLKEYEVVGRKLP 18


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,049,787
Number of Sequences: 53049
Number of extensions: 581356
Number of successful extensions: 1830
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)